LOCUS U00096 4639675 bp DNA circular BCT 24-JUN-2004 DEFINITION Escherichia coli K-12 MG1655 complete genome. ACCESSION U00096 AE000111 AE000112 AE000113 AE000114 AE000115 AE000116 AE000117 AE000118 AE000119 AE000120 AE000121 AE000122 AE000123 AE000124 AE000125 AE000126 AE000127 AE000128 AE000129 AE000130 AE000131 AE000132 AE000133 AE000134 AE000135 AE000136 AE000137 AE000138 AE000139 AE000140 AE000141 AE000142 AE000143 AE000144 AE000145 AE000146 AE000147 AE000148 AE000149 AE000150 AE000151 AE000152 AE000153 AE000154 AE000155 AE000156 AE000157 AE000158 AE000159 AE000160 AE000161 AE000162 AE000163 AE000164 AE000165 AE000166 AE000167 AE000168 AE000169 AE000170 AE000171 AE000172 AE000173 AE000174 AE000175 AE000176 AE000177 AE000178 AE000179 AE000180 AE000181 AE000182 AE000183 AE000184 AE000185 AE000186 AE000187 AE000188 AE000189 AE000190 AE000191 AE000192 AE000193 AE000194 AE000195 AE000196 AE000197 AE000198 AE000199 AE000200 AE000201 AE000202 AE000203 AE000204 AE000205 AE000206 AE000207 AE000208 AE000209 AE000210 AE000211 AE000212 AE000213 AE000214 AE000215 AE000216 AE000217 AE000218 AE000219 AE000220 AE000221 AE000222 AE000223 AE000224 AE000225 AE000226 AE000227 AE000228 AE000229 AE000230 AE000231 AE000232 AE000233 AE000234 AE000235 AE000236 AE000237 AE000238 AE000239 AE000240 AE000241 AE000242 AE000243 AE000244 AE000245 AE000246 AE000247 AE000248 AE000249 AE000250 AE000251 AE000252 AE000253 AE000254 AE000255 AE000256 AE000257 AE000258 AE000259 AE000260 AE000261 AE000262 AE000263 AE000264 AE000265 AE000266 AE000267 AE000268 AE000269 AE000270 AE000271 AE000272 AE000273 AE000274 AE000275 AE000276 AE000277 AE000278 AE000279 AE000280 AE000281 AE000282 AE000283 AE000284 AE000285 AE000286 AE000287 AE000288 AE000289 AE000290 AE000291 AE000292 AE000293 AE000294 AE000295 AE000296 AE000297 AE000298 AE000299 AE000300 AE000301 AE000302 AE000303 AE000304 AE000305 AE000306 AE000307 AE000308 AE000309 AE000310 AE000311 AE000312 AE000313 AE000314 AE000315 AE000316 AE000317 AE000318 AE000319 AE000320 AE000321 AE000322 AE000323 AE000324 AE000325 AE000326 AE000327 AE000328 AE000329 AE000330 AE000331 AE000332 AE000333 AE000334 AE000335 AE000336 AE000337 AE000338 AE000339 AE000340 AE000341 AE000342 AE000343 AE000344 AE000345 AE000346 AE000347 AE000348 AE000349 AE000350 AE000351 AE000352 AE000353 AE000354 AE000355 AE000356 AE000357 AE000358 AE000359 AE000360 AE000361 AE000362 AE000363 AE000364 AE000365 AE000366 AE000367 AE000368 AE000369 AE000370 AE000371 AE000372 AE000373 AE000374 AE000375 AE000376 AE000377 AE000378 AE000379 AE000380 AE000381 AE000382 AE000383 AE000384 AE000385 AE000386 AE000387 AE000388 AE000389 AE000390 AE000391 AE000392 AE000393 AE000394 AE000395 AE000396 AE000397 AE000398 AE000399 AE000400 AE000401 AE000402 AE000403 AE000404 AE000405 AE000406 AE000407 AE000408 AE000409 AE000410 AE000411 AE000412 AE000413 AE000414 AE000415 AE000416 AE000417 AE000418 AE000419 AE000420 AE000421 AE000422 AE000423 AE000424 AE000425 AE000426 AE000427 AE000428 AE000429 AE000430 AE000431 AE000432 AE000433 AE000434 AE000435 AE000436 AE000437 AE000438 AE000439 AE000440 AE000441 AE000442 AE000443 AE000444 AE000445 AE000446 AE000447 AE000448 AE000449 AE000450 AE000451 AE000452 AE000453 AE000454 AE000455 AE000456 AE000457 AE000458 AE000459 AE000460 AE000461 AE000462 AE000463 AE000464 AE000465 AE000466 AE000467 AE000468 AE000469 AE000470 AE000471 AE000472 AE000473 AE000474 AE000475 AE000476 AE000477 AE000478 AE000479 AE000480 AE000481 AE000482 AE000483 AE000484 AE000485 AE000486 AE000487 AE000488 AE000489 AE000490 AE000491 AE000492 AE000493 AE000494 AE000495 AE000496 AE000497 AE000498 AE000499 AE000500 AE000501 AE000502 AE000503 AE000504 AE000505 AE000506 AE000507 AE000508 AE000509 AE000510 VERSION U00096.2 GI:48994873 KEYWORDS . SOURCE Escherichia coli K12 ORGANISM Escherichia coli K12 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 4639675) AUTHORS Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F., Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J., Mau,B. and Shao,Y. TITLE The complete genome sequence of Escherichia coli K-12 JOURNAL Science 277 (5331), 1453-1474 (1997) MEDLINE 97426617 REFERENCE 2 (bases 1 to 4639675) AUTHORS Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y., Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and Wanner,B.L. TITLE Workshop on Annotation of Escherichia coli K-12 JOURNAL Unpublished REMARK Woods Hole, Mass., on 14-18 November 2003 (sequence corrections) REFERENCE 3 (bases 1 to 4639675) AUTHORS Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D., Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H. TITLE ASAP: Escherichia coli K-12 strain MG1655 version m56 JOURNAL Unpublished REMARK ASAP download 10 June 2004 (annotation updates) REFERENCE 4 (bases 1 to 4639675) AUTHORS Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T. TITLE A more accurate sequence comparison between genomes of Escherichia coli K12 W3110 and MG1655 strains JOURNAL Unpublished REMARK GenBank accessions AG613214 to AG613378 (sequence corrections) REFERENCE 5 (bases 1 to 4639675) AUTHORS Perna,N.T. TITLE Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic sequence correction JOURNAL Unpublished REMARK GenBank accession AY605712 (sequence corrections) REFERENCE 6 (bases 1 to 4639675) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (16-JAN-1997) Laboratory of Genetics, University of Wisconsin, 445 Henry Mall, Madison, WI 53706, USA REFERENCE 7 (bases 1 to 4639675) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (02-SEP-1997) Laboratory of Genetics, University of Wisconsin, 445 Henry Mall, Madison, WI 53706, USA REFERENCE 8 (bases 1 to 4639675) AUTHORS Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (13-OCT-1998) Laboratory of Genetics, University of Wisconsin, 445 Henry Mall, Madison, WI 53706, USA REFERENCE 9 (bases 1 to 4639675) AUTHORS Blattner,F.R. and Plunkett,G. III. TITLE Direct Submission JOURNAL Submitted (10-JUN-2004) Laboratory of Genetics, University of Wisconsin, 445 Henry Mall, Madison, WI 53706, USA REMARK Sequence update by submitter COMMENT On or before Jun 21, 2004 this sequence version replaced gi:1786181, gi:1786192, gi:2367095, gi:1786217, gi:1786230, gi:1786240, gi:1786250, gi:1786262, gi:1786283, gi:1786298, gi:1786306, gi:1786315, gi:1786327, gi:1786339, gi:1786348, gi:1786358, gi:1786370, gi:1786383, gi:1786395, gi:1786402, gi:1786415, gi:2367098, gi:2367099, gi:1786454, gi:1786465, gi:2367103, gi:2367108, gi:1786501, gi:1786510, gi:1786520, gi:1786532, gi:1786542, gi:1786554, gi:1786568, gi:1786580, gi:1786596, gi:1786603, gi:1786614, gi:1786628, gi:1786639, gi:1786649, gi:1786660, gi:1786671, gi:1786683, gi:1786692, gi:1786705, gi:1786716, gi:1786728, gi:1786739, gi:1786751, gi:1786766, gi:1786782, gi:1786790, gi:1786800, gi:1786808, gi:1786819, gi:1786836, gi:1786849, gi:1786862, gi:1786875, gi:1786888, gi:1786896, gi:1786910, gi:1786920, gi:1786934, gi:1786947, gi:1786955, gi:1786967, gi:1786978, gi:1786988, gi:1786998, gi:1787015, gi:1787025, gi:1787036, gi:1787047, gi:1787058, gi:1787070, gi:1787084, gi:1787097, gi:1787106, gi:1787115, gi:1787125, gi:1787134, gi:1787148, gi:1787156, gi:1787169, gi:1787180, gi:1787189, gi:1787202, gi:2367111, gi:2367113, gi:1787233, gi:1787248, gi:1787256, gi:1787265, gi:1787282, gi:1787293, gi:1787308, gi:1787322, gi:1787332, gi:1787345, gi:1787358, gi:1787371, gi:1787382, gi:1787405, gi:1787417, gi:1787434, gi:1787444, gi:1787453, gi:1787467, gi:1787476, gi:1787486, gi:1787496, gi:1787509, gi:1787523, gi:2367115, gi:1787543, gi:2367117, gi:1787566, gi:1787578, gi:1787588, gi:1787600, gi:1787613, gi:1787633, gi:1787643, gi:1787652, gi:1787665, gi:1787673, gi:1787682, gi:1787695, gi:1787706, gi:1787720, gi:1787730, gi:1787742, gi:1787752, gi:1787764, gi:1787773, gi:1787783, gi:1787790, gi:1787801, gi:1787814, gi:2367119, gi:1787841, gi:1787862, gi:1787875, gi:1787888, gi:1787898, gi:2367121, gi:1787921, gi:1787935, gi:1787945, gi:1787955, gi:1787966, gi:1787978, gi:2367122, gi:1787997, gi:1788011, gi:1788022, gi:1788033, gi:1788045, gi:1788058, gi:1788067, gi:1788078, gi:1788089, gi:1788106, gi:1788117, gi:1788129, gi:1788139, gi:1788154, gi:1788163, gi:1788179, gi:1788189, gi:1788200, gi:1788214, gi:1788229, gi:1788241, gi:1788257, gi:2367124, gi:1788285, gi:2367125, gi:1788298, gi:1788310, gi:2367127, gi:1788338, gi:1788354, gi:1788373, gi:1788382, gi:1788395, gi:1788413, gi:1788425, gi:2367129, gi:1788447, gi:1788456, gi:1788470, gi:1788479, gi:1788489, gi:1788498, gi:1788508, gi:1788520, gi:2367131, gi:1788547, gi:1788555, gi:2367132, gi:1788570, gi:1788582, gi:1788594, gi:1788605, gi:1788623, gi:1788634, gi:1788647, gi:1788659, gi:1788672, gi:1788684, gi:1788694, gi:1788709, gi:1788718, gi:1788731, gi:2367135, gi:2367137, gi:1788763, gi:1788775, gi:1788789, gi:1788805, gi:1788813, gi:1788821, gi:1788839, gi:1788850, gi:1788862, gi:1788870, gi:1788883, gi:1788899, gi:1788907, gi:2367139, gi:1788927, gi:1788939, gi:2367141, gi:2367142, gi:1788975, gi:2367143, gi:2367147, gi:1789011, gi:1789024, gi:1789037, gi:2367149, gi:2367151, gi:2367153, gi:2367155, gi:2367156, gi:1789110, gi:2367157, gi:2367160, gi:1789143, gi:1789153, gi:2367162, gi:2367163, gi:1789185, gi:1789195, gi:2367165, gi:2367168, gi:2367170, gi:1789239, gi:2367171, gi:2367173, gi:1789270, gi:1789282, gi:2367176, gi:2367178, gi:1789319, gi:2367179, gi:1789344, gi:2367181, gi:2367182, gi:2367184, gi:2367186, gi:1789405, gi:2367187, gi:1789431, gi:1789441, gi:1789451, gi:2367189, gi:2367191, gi:2367194, gi:1789499, gi:2367197, gi:1789524, gi:1789536, gi:2367199, gi:1789562, gi:2367201, gi:2367203, gi:1789607, gi:1789619, gi:2367205, gi:2367207, gi:1789659, gi:2367209, gi:2367211, gi:1789694, gi:1789718, gi:1789734, gi:2367213, gi:1789758, gi:2367215, gi:1789783, gi:1789798, gi:2367219, gi:2367220, gi:2367222, gi:2367227, gi:1789840, gi:1789854, gi:1789868, gi:1789880, gi:2367230, gi:2367232, gi:1789910, gi:1789919, gi:1789931, gi:2367235, gi:2367238, gi:1789957, gi:2367241, gi:1789977, gi:1789989, gi:2367244, gi:2367246, gi:2367249, gi:2367251, gi:1790036, gi:2367252, gi:1790063, gi:2367253, gi:2367255, gi:2367258, gi:1790105, gi:2367261, gi:2367266, gi:1790142, gi:2367269, gi:1790166, gi:2367272, gi:1790188, gi:2367276, gi:2367278, gi:2367282, gi:2367291, gi:2367294, gi:2367299, gi:2367306, gi:2367315, gi:2367318, gi:1790295, gi:2367320, gi:2367324, gi:2367326, gi:2367328, gi:1790356, gi:1790374, gi:1790385, gi:2367332, gi:1790404, gi:2367333, gi:2367336, gi:1790440, gi:1790448, gi:1790456, gi:2367338, gi:2367339, gi:2367340, gi:2367344, gi:2367346, gi:2367349, gi:2367351, gi:2367352, gi:1790563, gi:1790574, gi:1790582, gi:2367354, gi:1790607, gi:2367356, gi:2367357, gi:1790649, gi:2367360, gi:1790670, gi:2367361, gi:2367366, gi:1790711, gi:2367368, gi:1790732, gi:2367369, gi:2367372, gi:2367374, gi:1790777, gi:1790789, gi:2367375, gi:2367377, gi:2367380, gi:2367382, gi:2367383, gi:1790858, gi:6626251. FEATURES Location/Qualifiers source 1..4639675 /organism="Escherichia coli K12" /mol_type="genomic DNA" /strain="K-12" /sub_strain="MG1655" /db_xref="taxon:83333" gene 190..255 /gene="thrL" /locus_tag="b0001" CDS 190..255 /gene="thrL" /locus_tag="b0001" /function="leader; Amino acid biosynthesis: Threonine" /note="go_process: threonine biosynthesis [goid 0009088]" /codon_start=1 /transl_table=11 /product="thr operon leader peptide" /protein_id="AAC73112.1" /db_xref="GI:1786182" /db_xref="ASAP:6" /translation="MKRISTTITTTITITTGNGAG" gene 337..2799 /gene="thrA" /locus_tag="b0002" /note="synonyms: Hs, thrD" CDS 337..2799 /gene="thrA" /locus_tag="b0002" /EC_number="2.7.2.4" /EC_number="1.1.1.3" /function="enzyme; Amino acid biosynthesis: Threonine" /note="go_component: cytoplasm [goid 0005737]; go_process: threonine biosynthesis [goid 0009088]; go_process: methionine biosynthesis [goid 0009086]; go_process: homoserine biosynthesis [goid 0009090]" /codon_start=1 /transl_table=11 /product="bifunctional: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal)" /protein_id="AAC73113.1" /db_xref="GI:1786183" /db_xref="ASAP:8" /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY LESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACL RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA LLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD FLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLN AGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG KVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG NDVTAAGVFADLLRTLSWKLGV" gene 2801..3733 /gene="thrB" /locus_tag="b0003" CDS 2801..3733 /gene="thrB" /locus_tag="b0003" /EC_number="2.7.1.39" /function="enzyme; Amino acid biosynthesis: Threonine" /note="go_component: cytoplasm [goid 0005737]; go_process: threonine biosynthesis [goid 0009088]" /codon_start=1 /transl_table=11 /product="homoserine kinase" /protein_id="AAC73114.1" /db_xref="GI:1786184" /db_xref="ASAP:10" /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPETA QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN" gene 3734..5020 /gene="thrC" /locus_tag="b0004" CDS 3734..5020 /gene="thrC" /locus_tag="b0004" /EC_number="4.2.99.2" /function="enzyme; Amino acid biosynthesis: Threonine" /note="go_component: cytoplasm [goid 0005737]; go_process: threonine biosynthesis [goid 0009088]" /codon_start=1 /transl_table=11 /product="threonine synthase" /protein_id="AAC73115.1" /db_xref="GI:1786185" /db_xref="ASAP:12" /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR LLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ" gene 5234..5530 /gene="yaaX" /locus_tag="b0005" CDS 5234..5530 /gene="yaaX" /locus_tag="b0005" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73116.1" /db_xref="GI:1786186" /db_xref="ASAP:15" /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGY YWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR" gene complement(5683..6459) /gene="yaaA" /locus_tag="b0006" CDS complement(5683..6459) /gene="yaaA" /locus_tag="b0006" /function="orf; Unknown" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73117.1" /db_xref="GI:1786187" /db_xref="ASAP:18" /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF IIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR" gene complement(6529..7959) /gene="yaaJ" /locus_tag="b0007" CDS complement(6529..7959) /gene="yaaJ" /locus_tag="b0007" /function="putative transport; Transport of small molecules: Amino acids, amines" /note="putative alanine/glycine transport protein (AGCS family); go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="inner membrane transport protein" /protein_id="AAC73118.1" /db_xref="GI:1786188" /db_xref="ASAP:20" /translation="MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFG KSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIG MATSFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSG VQANAVARALSFSFDFPPLVTGIILAVFTLLAITRGLHGVARLMQGFVPLMAIIWVLT SLVICVMNIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMG STPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNGTTYMPLEGIQ LIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRIC TFATVIGGTLLSLPLMWQLADIIMACMAITNLTAILLLSPVVHTIASDYLRQRKLGVR PVFDPLRYPDIGRQLSPDAWDDVSQE" gene 8238..9191 /gene="talB" /locus_tag="b0008" CDS 8238..9191 /gene="talB" /locus_tag="b0008" /EC_number="2.2.1.2" /function="enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" /note="go_component: cytoplasm [goid 0005737]; go_process: pentose-phosphate shunt, non-oxidative branch [goid 0009052]" /codon_start=1 /transl_table=11 /product="transaldolase B" /protein_id="AAC73119.1" /db_xref="GI:1786189" /db_xref="ASAP:27" /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY ETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARI TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL" gene 9306..9893 /gene="mog" /locus_tag="b0009" /note="synonyms: mogA, bisD, chlG" CDS 9306..9893 /gene="mog" /locus_tag="b0009" /function="transport; Biosynthesis of cofactors, carriers: Molybdopterin" /note="go_component: cytoplasm [goid 0005737]; go_process: Mo-molybdopterin cofactor biosynthesis [goid 0006777]" /codon_start=1 /transl_table=11 /product="putative molybdochetalase in molybdopterine biosynthesis" /protein_id="AAC73120.1" /db_xref="GI:1786190" /db_xref="ASAP:30" /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELET RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFA SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE" gene complement(9928..10494) /gene="yaaH" /locus_tag="b0010" CDS complement(9928..10494) /gene="yaaH" /locus_tag="b0010" /function="orf; Unknown" /note="putative regulator, integral membrane protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73121.1" /db_xref="GI:1786191" /db_xref="ASAP:32" /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF YGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC GASAIYLAMGEVLNEQFGRTVLPIGESH" gene complement(10643..11356) /gene="yaaW" /locus_tag="b0011" CDS complement(10643..11356) /gene="yaaW" /locus_tag="b0011" /function="putative enzyme; Not classified" /codon_start=1 /transl_table=11 /product="conserved hypothetical protein" /protein_id="AAC73122.1" /db_xref="GI:1786193" /db_xref="ASAP:37" /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAVDARVNELEELLPLLMKDKL LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT IPAVLQIACLRRMVSATQV" gene 10725..11315 /gene="htgA" /locus_tag="b0012" /note="synonym: htpY" CDS 10725..11315 /gene="htgA" /locus_tag="b0012" /function="regulator; Adaptations, atypical conditions" /note="transcriptional activator for sigma H (sigma 32) promoters, permitting growth at high temperature; go_function: transcriptional activator activity [goid 0016563]; go_process: protein folding [goid 0006457]; go_process: transcription [goid 0006350]; go_process: response to temperature [goid 0009266]" /codon_start=1 /transl_table=11 /product="positive regulator for sigma 32 heat shock promoters" /protein_id="AAC73123.1" /db_xref="GI:1786194" /db_xref="ASAP:40" /translation="MTALTPFSAAPTGPPSPAPRSKPCPSTLIAAWVRKMRVSWLESK CDTPFANNLSFISSGSSSSSSFTLASTACRNSCLCSSSIFFQVLRRNCSSNCCSISNV DISLSAFSFNRFETSSKMARYNLPCPRSLLAILSPPKCCNSPAISCQLRRCCSGCPSI DLNSSLRISTLERRVLPFSLWVSNRAKFANCSSLQC" gene complement(11382..11786) /gene="yaaI" /locus_tag="b0013" CDS complement(11382..11786) /gene="yaaI" /locus_tag="b0013" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73124.1" /db_xref="GI:1786195" /db_xref="ASAP:43" /translation="MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLAL KLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININS DNDNKRCVSKITFSGHTVNSSDMATLKIIGDD" gene 12163..14079 /gene="dnaK" /locus_tag="b0014" /note="synonyms: gro, groP, groPAB, groPC, groPF, grpC, grpF, seg" CDS 12163..14079 /gene="dnaK" /locus_tag="b0014" /function="factor; Chaperones" /note="chaperone Hsp70 in DNA biosynthesis/cell division; go_component: cytoplasm [goid 0005737]; go_process: protein folding [goid 0006457]; go_process: response to osmotic stress [goid 0006970]" /codon_start=1 /transl_table=11 /product="chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins" /protein_id="AAC73125.1" /db_xref="GI:1786196" /db_xref="ASAP:52" /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD DVVDAEFEEVKDKK" gene 14168..15298 /gene="dnaJ" /locus_tag="b0015" /note="synonyms: groP, grpC" CDS 14168..15298 /gene="dnaJ" /locus_tag="b0015" /function="factor; Chaperones" /note="heat shock protein (Hsp40), co-chaperone with DnaK; go_component: cytoplasm [goid 0005737]; go_process: protein folding [goid 0006457]" /codon_start=1 /transl_table=11 /product="chaperone with DnaK; heat shock protein" /protein_id="AAC73126.1" /db_xref="GI:1786197" /db_xref="ASAP:54" /translation="MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAE AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA GVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN ERQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR" repeat_region 15388..16730 /insertion_seq="IS186" /db_xref="ASAP:56" gene 15445..16557 /gene="yi81_1" /locus_tag="b0016" CDS 15445..16557 /gene="yi81_1" /locus_tag="b0016" /function="IS, phage, Tn; Transposon-related functions" /note="homolog, IS186 transposase" /codon_start=1 /transl_table=11 /product="IS186 hypothetical protein" /protein_id="AAC73127.1" /db_xref="GI:1786198" /db_xref="ASAP:58" /translation="MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLL RLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAV TGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFA QTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGL DCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQA ETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPEL AKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN" gene complement(15869..16177) /gene="yi82_1" /locus_tag="b0017" CDS complement(15869..16177) /gene="yi82_1" /locus_tag="b0017" /function="IS, phage, Tn; Transposon-related functions" /note="homolog, IS186 and IS421 protein" /codon_start=1 /transl_table=11 /product="IS186 and IS421 hypothetical protein" /protein_id="AAC73128.1" /db_xref="GI:1786199" /db_xref="ASAP:60" /translation="MPERELRLFYYLNCLSLQWFHRSYRNPARAENPSCQSAFLLQLT SAILASEPGRYNQLLQKQVSGYIRDANRIPGQQCVSRLPFAQIGPAVQRLCCRLAQNQ " gene complement(16751..16960) /gene="mokC" /locus_tag="b0018" /note="synonyms: orf69, gefL" CDS complement(16751..16960) /gene="mokC" /locus_tag="b0018" /function="component of addiction module" /function="modulation of cell killing" /codon_start=1 /transl_table=11 /product="regulatory peptide whose translation enables hokC (gef) expression" /protein_id="AAC73129.1" /db_xref="GI:1786200" /db_xref="ASAP:64" /translation="MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVT RKDLCEVHIRTGQTEVAVFTAYESE" gene complement(16751..16903) /gene="hokC" /locus_tag="b4412" /note="synonym: gef" CDS complement(16751..16903) /gene="hokC" /locus_tag="b4412" /function="component of addiction module" /function="cell killing" /codon_start=1 /transl_table=11 /product="small toxic membrane polypeptide" /protein_id="AAT48122.1" /db_xref="GI:48994874" /db_xref="ASAP:47278" /translation="MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVF TAYESE" gene 16952..17006 /gene="sokC" /locus_tag="b4413" /note="synonym: sof" misc_RNA 16952..17006 /gene="sokC" /locus_tag="b4413" /product="antisense RNA blocking mokC (orf69) and hokC (gef) translation" /function="component of addiction module" /db_xref="ASAP:47238" gene 17489..18655 /gene="nhaA" /locus_tag="b0019" /note="synonym: ant" CDS 17489..18655 /gene="nhaA" /locus_tag="b0019" /function="transport; Transport of small molecules: Cations" /note="sodium:proton antiporter (NhaA family); go_component: inner membrane [goid 0019866]; go_process: response to pH [goid 0009268]" /codon_start=1 /transl_table=11 /product="Na+/H antiporter, pH dependent" /protein_id="AAC73130.1" /db_xref="GI:1786201" /db_xref="ASAP:68" /translation="MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLET PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVYILVGVVLWTA VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGIL CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV" gene 18715..19620 /gene="nhaR" /locus_tag="b0020" CDS 18715..19620 /gene="nhaR" /locus_tag="b0020" /function="regulator; Transport of small molecules: Cations" /note="transcriptional activator of cation transport (LysR family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_process: transcription [goid 0006350]; go_process: response to pH [goid 0009268]" /codon_start=1 /transl_table=11 /product="transcriptional activator of nhaA" /protein_id="AAC73131.1" /db_xref="GI:1786202" /db_xref="ASAP:72" /translation="MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRAL EERLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVA DALSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQE GLFSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNV EILGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAE RMIQHPAVQRICNTDYSALFSPAVR" repeat_region complement(19796..20563) /insertion_seq="IS1" /db_xref="ASAP:73" gene complement(19811..20314) /gene="insB_1" /locus_tag="b0021" CDS complement(19811..20314) /gene="insB_1" /locus_tag="b0021" /function="IS, phage, Tn; Transposon-related functions" /codon_start=1 /transl_table=11 /product="IS1 protein InsB" /protein_id="AAC73132.1" /db_xref="GI:1786203" /db_xref="ASAP:75" /translation="MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ" gene complement(20233..20508) /gene="insA_1" /locus_tag="b0022" CDS complement(20233..20508) /gene="insA_1" /locus_tag="b0022" /function="IS, phage, Tn; Transposon-related functions" /codon_start=1 /transl_table=11 /product="IS1 protein InsA" /protein_id="AAC73133.1" /db_xref="GI:1786204" /db_xref="ASAP:78" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR" gene complement(20815..21078) /gene="rpsT" /locus_tag="b0023" /note="synonym: sups20" CDS complement(20815..21078) /gene="rpsT" /locus_tag="b0023" /function="structural component; Ribosomal proteins - synthesis, modification" /note="go_component: cytosolic ribosome (sensu Bacteria) [goid 0009281]; go_component: cytoplasm [goid 0005737]; go_function: structural constituent of ribosome [goid 0003735]; go_process: protein biosynthesis [goid 0006412]" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S20" /protein_id="AAC73134.1" /db_xref="GI:1786206" /db_xref="ASAP:82" /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA" gene 21181..21399 /gene="yaaY" /locus_tag="b0024" CDS 21181..21399 /gene="yaaY" /locus_tag="b0024" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73135.1" /db_xref="GI:1786207" /db_xref="ASAP:89" /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGQFLPVICAMAMK SHFFLISVLNRRLTLTAVQGILGRFSLF" gene 21407..22348 /gene="ribF" /locus_tag="b0025" CDS 21407..22348 /gene="ribF" /locus_tag="b0025" /EC_number="2.7.1.26" /EC_number="2.7.7.2" /function="putative regulator; Not classified" /note="bifunctional: flavokinase; FAD synthetase; go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="flavokinase and FAD synthetase" /protein_id="AAC73136.1" /db_xref="GI:1786208" /db_xref="ASAP:91" /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV SPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA" gene 22391..25207 /gene="ileS" /locus_tag="b0026" CDS 22391..25207 /gene="ileS" /locus_tag="b0026" /EC_number="6.1.1.5" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="go_component: cytoplasm [goid 0005737]; go_process: amino acid activation [goid 0006418]" /codon_start=1 /transl_table=11 /product="isoleucine tRNA synthetase" /protein_id="AAC73137.1" /db_xref="GI:2367096" /db_xref="ASAP:94" /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALG DELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV AEHAEICGRCVSNVAGDGEKRKFA" gene 25207..25701 /gene="lspA" /locus_tag="b0027" /note="synonyms: dapB, ileS" CDS 25207..25701 /gene="lspA" /locus_tag="b0027" /EC_number="3.4.23.36" /function="enzyme; Protein, peptide secretion" /note="go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="prolipoprotein signal peptidase (SPase II)" /protein_id="AAC73138.1" /db_xref="GI:1786210" /db_xref="ASAP:96" /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYA LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSR AKKQ" gene 25826..26275 /gene="fkpB" /locus_tag="b0028" /note="synonym: slpA" CDS 25826..26275 /gene="fkpB" /locus_tag="b0028" /EC_number="5.2.1.8" /function="putative enzyme; Proteins - translation and modification" /note="FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase); go_component: cytoplasm [goid 0005737]; go_process: protein folding [goid 0006457]" /codon_start=1 /transl_table=11 /product="FKBX-type 16KD peptidyl-prolyl cis-trans isomerase (a rotamase)" /protein_id="AAC73139.1" /db_xref="GI:1786211" /db_xref="ASAP:101" /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA" gene 26277..27227 /gene="ispH" /locus_tag="b0029" /note="synonym: lytB" CDS 26277..27227 /gene="ispH" /locus_tag="b0029" /function="regulator; Global regulatory functions" /note="enzyme in pathway of mevalonate-independent isoprenoid biosynthesis; go_component: cytoplasm [goid 0005737]; go_process: response to drug [goid 0042493]" /codon_start=1 /transl_table=11 /product="IspH protein" /protein_id="AAC73140.1" /db_xref="GI:1786212" /db_xref="ASAP:103" /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD" gene 27293..28207 /gene="rihC" /locus_tag="b0030" /note="synonym: yaaF" CDS 27293..28207 /gene="rihC" /locus_tag="b0030" /EC_number="3.2.2.-" /function="orf; Unknown" /note="ribonucleoside hydrolase 3; go_process: nucleotide-sugar biosynthesis [goid 0009226]" /codon_start=1 /transl_table=11 /product="nucleoside hydrolase" /protein_id="AAC73141.1" /db_xref="GI:1786213" /db_xref="ASAP:109" /translation="MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTP NAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNRTGKMLHALF SHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLG KPANVQVALDLDVKGFQQWVAEVLALAS" gene 28374..29195 /gene="dapB" /locus_tag="b0031" CDS 28374..29195 /gene="dapB" /locus_tag="b0031" /EC_number="1.3.1.26" /function="enzyme; Amino acid biosynthesis: Lysine" /note="go_component: cytoplasm [goid 0005737]; go_process: lysine biosynthesis via diaminopimelate [goid 0009089]" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate reductase" /protein_id="AAC73142.1" /db_xref="GI:1786214" /db_xref="ASAP:112" /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVG EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL" gene 29651..30799 /gene="carA" /locus_tag="b0032" /note="synonyms: arg+ura, cap, pyrA" CDS 29651..30799 /gene="carA" /locus_tag="b0032" /EC_number="6.3.5.5" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /note="carbamoyl phosphate synthetase, glutamine amidotransferase small subunit; go_process: arginine biosynthesis [goid 0006526]; go_process: pyrimidine nucleotide biosynthesis [goid 0006221]" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthetase, glutamine (small) subunit" /protein_id="AAC73143.1" /db_xref="GI:1786215" /db_xref="ASAP:118" /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK" gene 30817..34038 /gene="carB" /locus_tag="b0033" /note="synonyms: arg+ura, cap, pyrA" CDS 30817..34038 /gene="carB" /locus_tag="b0033" /EC_number="6.3.5.5" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /note="carbamoyl phosphate synthase, large subunit; go_process: arginine biosynthesis [goid 0006526]; go_process: pyrimidine nucleotide biosynthesis [goid 0006221]" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase large subunit" /protein_id="AAC73144.1" /db_xref="GI:1786216" /db_xref="ASAP:121" /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVD GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGV REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK" gene 34195..34695 /gene="caiF" /locus_tag="b0034" CDS 34195..34695 /gene="caiF" /locus_tag="b0034" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="EcoGene suggests alternate start codon; transcriptional regulator of carnitine metabolism; go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_process: amine catabolism [goid 0009310]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="transcriptional regulator of cai operon" /protein_id="AAC73145.1" /db_xref="GI:1786218" /db_xref="ASAP:125" /translation="MKLHTIDISTILIWPCLIASKRVIARLLICETGVRMCEGYVEKP LYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLE GRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMML SKSMRR" gene complement(34781..35392) /gene="caiE" /locus_tag="b0035" CDS complement(34781..35392) /gene="caiE" /locus_tag="b0035" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="EcoGene suggests alternate start codon; putative acyl transferase, stimulates activity of carnitine racemase and carnitine dehydrogenase; go_process: amine catabolism [goid 0009310]; go_process: carnitine catabolism [goid 0042413]" /codon_start=1 /transl_table=11 /product="possible synthesis of cofactor for carnitine racemase and dehydratase" /protein_id="AAC73146.1" /db_xref="GI:1786219" /db_xref="ASAP:128" /translation="MERTLTTVSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYI GPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCLIGRDA LVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKR LNTKEYQDLVGRCHVSLHETQPLRQMEENRPRLQGTTDVTPKR" gene complement(35377..36270) /gene="caiD" /locus_tag="b0036" CDS complement(35377..36270) /gene="caiD" /locus_tag="b0036" /EC_number="5.-.-.-" /function="enzyme; Degradation of small molecules: Amines" /note="bifunctional: carnitine racemase; crotonobetainyl-CoA hydratase; go_process: amine catabolism [goid 0009310]; go_process: carnitine catabolism [goid 0042413]" /codon_start=1 /transl_table=11 /product="carnitine racemase" /protein_id="AAC73147.1" /db_xref="GI:1786220" /db_xref="ASAP:130" /translation="MKQQGTTLPANNHTLKQYAFFAGMLSSLKKQKWRKGMSESLHLT RNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDL KAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADN ASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQ AELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHS EDAIEGPLAFAEKRDPVWKGR" gene complement(36271..37839) /gene="caiC" /locus_tag="b0037" CDS complement(36271..37839) /gene="caiC" /locus_tag="b0037" /EC_number="6.3.2.-" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="crotonobetaine/carnitine-CoA ligase; go_component: inner membrane [goid 0019866]; go_process: amine catabolism [goid 0009310]" /codon_start=1 /transl_table=11 /product="probable crotonobetaine/carnitine-CoA ligase" /protein_id="AAC73148.1" /db_xref="GI:1786221" /db_xref="ASAP:133" /translation="MDRGAMDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYS YLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL CEESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQ LKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRD DDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPM MIRTLMVQPPSANDQQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGII GDRPGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNP QATAKVLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPK IQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDL PRNCSGKIIRKNLK" gene complement(37898..39115) /gene="caiB" /locus_tag="b0038" CDS complement(37898..39115) /gene="caiB" /locus_tag="b0038" /EC_number="4.2.1.89" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="l-carnitine dehydratase, NAD(P)-binding; go_component: cytoplasm [goid 0005737]; go_process: carnitine catabolism [goid 0042413]; go_process: amine catabolism [goid 0009310]" /codon_start=1 /transl_table=11 /product="l-carnitine dehydratase" /protein_id="AAC73149.1" /db_xref="GI:1786222" /db_xref="ASAP:136" /translation="MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIE NVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFA RRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP MPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNG GEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPE GTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQY VARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDI QELVSKGLAKVED" gene complement(39244..40386) /gene="caiA" /locus_tag="b0039" CDS complement(39244..40386) /gene="caiA" /locus_tag="b0039" /EC_number="1.3.99.-" /function="putative regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="crotonobetaine reductase subunit II, FAD-binding; go_component: cytoplasm [goid 0005737]; go_function: electron acceptor activity [goid 0009054]; go_process: glyoxylate cycle [goid 0006097]; go_process: amine catabolism [goid 0009310]; go_process: carnitine catabolism [goid 0042413]" /codon_start=1 /transl_table=11 /product="probable carnitine operon oxidoreductase" /protein_id="AAC73150.1" /db_xref="GI:1786223" /db_xref="ASAP:139" /translation="MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVK ALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGT QEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSA YTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELD EKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRF QLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQ VLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR" gene complement(40417..41931) /gene="caiT" /locus_tag="b0040" CDS complement(40417..41931) /gene="caiT" /locus_tag="b0040" /function="putative transport; Central intermediary metabolism: Pool, multipurpose conversions" /note="putative betaine/carnitine/choline transport protein (BCCT family); go_component: inner membrane [goid 0019866]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="probable carnitine transporter" /protein_id="AAC73151.1" /db_xref="GI:1786224" /db_xref="ASAP:141" /translation="MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVF SYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSA AVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYF FFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTEC MQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV SGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIF LARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVAR AIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRI GWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD" gene 42367..43173 /gene="fixA" /locus_tag="b0041" CDS 42367..43173 /gene="fixA" /locus_tag="b0041" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="EcoGene suggests alternate start codon; putative flavoprotein reductase, carnitine metabolism; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="probable flavoprotein subunit, carnitine metabolism" /protein_id="AAC73152.1" /db_xref="GI:1786225" /db_xref="ASAP:145" /translation="MNDVSFMISGDAMKIITCYKCVPDEQDIAVNNADGSLDFSKADA KISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDD QFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVW SAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI" gene 43188..44129 /gene="fixB" /locus_tag="b0042" CDS 43188..44129 /gene="fixB" /locus_tag="b0042" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="putative electron transfer flavoprotein, NAD/FAD-binding domain, carnitine metabolism; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="probable flavoprotein subunit, carnitine metabolism" /protein_id="AAC73153.1" /db_xref="GI:1786226" /db_xref="ASAP:147" /translation="MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQA IQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYR LKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDAS RTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLC KAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQT IFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR" gene 44180..45466 /gene="fixC" /locus_tag="b0043" CDS 44180..45466 /gene="fixC" /locus_tag="b0043" /function="putative carrier; Energy metabolism, carbon: Electron transport" /note="carnitine metabolism related; go_process: carnitine catabolism [goid 0042413]" /codon_start=1 /transl_table=11 /product="flavoprotein; electron transport" /protein_id="AAC73154.1" /db_xref="GI:1786227" /db_xref="ASAP:149" /translation="MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKN VTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRS YSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILAD GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD GLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEY SAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSA MKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFT IDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL" gene 45463..45750 /gene="fixX" /locus_tag="b0044" CDS 45463..45750 /gene="fixX" /locus_tag="b0044" /function="putative carrier; Not classified" /note="putative ferredoxin, carnitine metabolism; go_process: carnitine catabolism [goid 0042413]" /codon_start=1 /transl_table=11 /product="putative ferredoxin" /protein_id="AAC73155.1" /db_xref="GI:1786228" /db_xref="ASAP:151" /translation="MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACP AGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG" gene 45807..47138 /gene="yaaU" /locus_tag="b0045" CDS 45807..47138 /gene="yaaU" /locus_tag="b0045" /function="putative transport; Not classified" /note="putative transport protein (MFS family); go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="putative transport protein" /protein_id="AAC73156.1" /db_xref="GI:1786229" /db_xref="ASAP:156" /translation="MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQL TPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMF VSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADL VGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFG EPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLG VGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGI WLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPI FINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG" gene 47246..47776 /gene="yabF" /locus_tag="b0046" CDS 47246..47776 /gene="yabF" /locus_tag="b0046" /function="putative enzyme; Not classified" /note="putative quinone oxidoreductase, subunit for the KefC K+ efflux system" /codon_start=1 /transl_table=11 /product="putative NAD(P)H oxidoreductase" /protein_id="AAC73157.1" /db_xref="GI:1786231" /db_xref="ASAP:159" /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLW AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA RHYKQRLLEWQEAHHG" gene 47769..49631 /gene="kefC" /locus_tag="b0047" /note="synonym: trkC" CDS 47769..49631 /gene="kefC" /locus_tag="b0047" /function="transport; Transport of small molecules: Cations" /note="K+ efflux antiporter, glutathione-regulated, NAD(P)-binding (CPA2 family); go_component: inner membrane [goid 0019866]; go_function: potassium:hydrogen antiporter activity [goid 0015386]" /codon_start=1 /transl_table=11 /product="K+ efflux antiporter, glutathione-regulated" /protein_id="AAC73158.1" /db_xref="GI:1786232" /db_xref="ASAP:161" /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGCGALQMVICGGLLG LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI PLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF FIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS" gene 49823..50302 /gene="folA" /locus_tag="b0048" /note="synonym: tmrA" CDS 49823..50302 /gene="folA" /locus_tag="b0048" /EC_number="1.5.1.3" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /note="dihydrofolate reductase type I, trimethoprim resistance; go_process: folic acid biosynthesis [goid 0046656]; go_process: 10-formyltetrahydrofolate biosynthesis [goid 0009257]" /codon_start=1 /transl_table=11 /product="dihydrofolate reductase type I; trimethoprim resistance" /protein_id="AAC73159.1" /db_xref="GI:1786233" /db_xref="ASAP:164" /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR" gene complement(50380..51222) /gene="apaH" /locus_tag="b0049" CDS complement(50380..51222) /gene="apaH" /locus_tag="b0049" /EC_number="3.6.1.41" /function="enzyme; Salvage of nucleosides and nucleotides" /note="go_component: cytoplasm [goid 0005737]; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="diadenosine tetraphosphatase" /protein_id="AAC73160.1" /db_xref="GI:1786234" /db_xref="ASAP:167" /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGE AAAS" gene complement(51229..51606) /gene="apaG" /locus_tag="b0050" CDS complement(51229..51606) /gene="apaG" /locus_tag="b0050" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73161.1" /db_xref="GI:1786235" /db_xref="ASAP:169" /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI DENGVPFSIDIPVFRLAVPTLIH" gene complement(51609..52430) /gene="ksgA" /locus_tag="b0051" CDS complement(51609..52430) /gene="ksgA" /locus_tag="b0051" /EC_number="2.1.1.-" /function="enzyme; Drug/analog sensitivity" /note="S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase, kasugamycin resistance; go_component: cytoplasm [goid 0005737]; go_process: RNA modification [goid 0009451]; go_process: response to drug [goid 0042493]" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase" /protein_id="AAC73162.1" /db_xref="GI:1786236" /db_xref="ASAP:175" /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES" gene complement(52427..53416) /gene="pdxA" /locus_tag="b0052" CDS complement(52427..53416) /gene="pdxA" /locus_tag="b0052" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" /note="NAD-dependent dehydrogenase/carboxylase, pyridoxine phosphate biosynthetic protein PdxJ-PdxA subunit; go_component: cytoplasm [goid 0005737]; go_process: pyridoxine biosynthesis [goid 0008615]" /codon_start=1 /transl_table=11 /product="pyridoxine biosynthesis" /protein_id="AAC73163.1" /db_xref="GI:1786237" /db_xref="ASAP:178" /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT NRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLA RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM GTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ GFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ" gene complement(53416..54702) /gene="surA" /locus_tag="b0053" CDS complement(53416..54702) /gene="surA" /locus_tag="b0053" /EC_number="5.2.1.8" /function="phenotype; Not classified" /note="peptidyl-prolyl cis-trans isomerase (PPIase), involved in maturation of outer membrane proteins; go_component: external outer membrane (sensu Gram-negative Bacteria) [goid 0009279]; go_process: protein folding [goid 0006457]" /codon_start=1 /transl_table=11 /product="survival protein" /protein_id="AAC73164.1" /db_xref="GI:1786238" /db_xref="ASAP:180" /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN" gene complement(54755..57109) /gene="imp" /locus_tag="b0054" /note="synonym: ostA" CDS complement(54755..57109) /gene="imp" /locus_tag="b0054" /function="phenotype; Adaptations, atypical conditions" /note="go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="organic solvent tolerance" /protein_id="AAC73165.1" /db_xref="GI:1786239" /db_xref="ASAP:183" /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKV SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI YDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL" gene 57364..58179 /gene="djlA" /locus_tag="b0055" /note="synonym: yabH" CDS 57364..58179 /gene="djlA" /locus_tag="b0055" /function="phenotype; Not classified" /note="co-chaperone of DnaK (DnaJ-like), implicated in regulation of colanic acid capsule; go_process: protein folding [goid 0006457]" /codon_start=1 /transl_table=11 /product="DnaJ-like membrane chaperone protein" /protein_id="AAC73166.1" /db_xref="GI:1786241" /db_xref="ASAP:187" /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE LGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDA TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK" gene 58474..59124 /gene="yabP" /locus_tag="b0056" CDS 58474..59124 /gene="yabP" /locus_tag="b0056" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73167.1" /db_xref="GI:1786242" /db_xref="ASAP:192" /translation="MKVSVPGMPVTLLNMSKNDIYKMVSGDKMDVKMNIFQRLWETLR HLFWSDKQTEAYKLLFNFVNNQTGNINASEYFTGAINENEREKFINSLELFNKLKTCA KNPDELVAKGNMRWVAQTFGDIELSVTFFIEKNKICTQTLQLHKGQGNLGVDLRKAYL PGVDMRDCYLGKKTMKGSNDILYERPGWNANLGVLPRTVLPRTVLTRTVLTWTVLP" gene 59121..59279 /gene="yabQ" /locus_tag="b0057" CDS 59121..59279 /gene="yabQ" /locus_tag="b0057" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73168.1" /db_xref="GI:1786243" /db_xref="ASAP:194" /translation="MNGATSLYDEVIIINKIPPKKIDTKGVATEEVATKKVLLNKLLT TQLLNEPE" gene complement(59687..60346) /gene="rluA" /locus_tag="b0058" /note="synonym: yabO" CDS complement(59687..60346) /gene="rluA" /locus_tag="b0058" /EC_number="4.2.1.70" /function="orf; Unknown" /note="23S rRNA pseudouridylate 746 synthase; go_process: RNA modification [goid 0009451]" /codon_start=1 /transl_table=11 /product="Ribosomal large subunit pseudouridine synthase A" /protein_id="AAC73169.1" /db_xref="GI:1786244" /db_xref="ASAP:196" /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD F" gene complement(60358..63264) /gene="hepA" /locus_tag="b0059" /note="synonym: rapA" CDS complement(60358..63264) /gene="hepA" /locus_tag="b0059" /function="putative enzyme; RNA synthesis, modification, DNA transcription" /note="ATPase associated with RNA polymerase and transcriptional activator; go_process: RNA modification [goid 0009451]" /codon_start=1 /transl_table=11 /product="probable ATP-dependent RNA helicase" /protein_id="AAC73170.1" /db_xref="GI:1786245" /db_xref="ASAP:198" /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ" gene complement(63429..65780) /gene="polB" /locus_tag="b0060" /note="synonym: dinA" CDS complement(63429..65780) /gene="polB" /locus_tag="b0060" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA polymerase II and 3' -> 5' exonuclease; go_component: cytoplasm [goid 0005737]; go_process: DNA dependent DNA replication [goid 0006261]; go_process: DNA repair [goid 0006281]; go_process: response to radiation [goid 0009314]; go_process: SOS response [goid 0009432]" /codon_start=1 /transl_table=11 /product="DNA polymerase II" /protein_id="AAC73171.1" /db_xref="GI:1786246" /db_xref="ASAP:202" /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT RHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPD VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF" gene complement(65855..66550) /gene="araD" /locus_tag="b0061" CDS complement(65855..66550) /gene="araD" /locus_tag="b0061" /EC_number="5.1.3.4" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="go_component: cytoplasm [goid 0005737]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="L-ribulose-5-phosphate 4-epimerase" /protein_id="AAC73172.1" /db_xref="GI:1786247" /db_xref="ASAP:209" /translation="MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT IWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKH YLRKHGAKAYYGQ" gene complement(66835..68337) /gene="araA" /locus_tag="b0062" CDS complement(66835..68337) /gene="araA" /locus_tag="b0062" /EC_number="5.3.1.4" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="go_component: cytoplasm [goid 0005737]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="L-arabinose isomerase" /protein_id="AAC73173.1" /db_xref="GI:1786248" /db_xref="ASAP:221" /translation="MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL PCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV NSISDGDVNALVDEYESCYTMTPATQIHGKKRQNVLEAARIELGMKRFLEQGGFHAFT TTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED YTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI VASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHH TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR" gene complement(68348..70048) /gene="araB" /locus_tag="b0063" CDS complement(68348..70048) /gene="araB" /locus_tag="b0063" /EC_number="2.7.1.16" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="go_component: cytoplasm [goid 0005737]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="L-ribulokinase" /protein_id="AAC73174.1" /db_xref="GI:1786249" /db_xref="ASAP:223" /translation="MAIAIGLDFGSDSVRALAVDCATGEEIATSVEWYPRWQKGQFCD APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG QSAFGDIYAWFGRVLGWPLEQLAAQHPELKTQINASQKQLLPALTEAWAKNPSLDHLP VVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP SAQQKMASAVEKTLQPCSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL " gene 70387..71265 /gene="araC" /locus_tag="b0064" CDS 70387..71265 /gene="araC" /locus_tag="b0064" /function="regulator; Degradation of small molecules: Carbon compounds" /note="transcriptional regulator of arabinose catabolism (AraC/XylS family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_function: transcriptional repressor activity [goid 0016564]; go_process: carbohydrate catabolism [goid 0016052]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="transcriptional regulator for ara operon" /protein_id="AAC73175.1" /db_xref="GI:1786251" /db_xref="ASAP:236" /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA YWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLL LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF RAGCEEKVNDVAVKLS" gene 71351..72115 /gene="yabI" /locus_tag="b0065" CDS 71351..72115 /gene="yabI" /locus_tag="b0065" /function="orf; Unknown" /note="putative integral membrane protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73176.1" /db_xref="GI:1786252" /db_xref="ASAP:241" /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG LGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV" gene complement(72229..72927) /gene="yabJ" /locus_tag="b0066" /note="synonym: thiQ" CDS complement(72229..72927) /gene="yabJ" /locus_tag="b0066" /function="putative transport; Not classified" /note="thiamine transport protein (ABC superfamily, atp_bind); go_component: cytoplasm [goid 0005737]; go_process: thiamin biosynthesis [goid 0009228]" /codon_start=1 /transl_table=11 /product="putative ATP-binding component of a transport system" /protein_id="AAC73177.1" /db_xref="GI:1786253" /db_xref="ASAP:244" /translation="MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL IAGFLTPASGSLTIDGVDHTTMPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL NAVQQGKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELL SGKASASALLGITG" gene complement(72911..74521) /gene="yabK" /locus_tag="b0067" /note="synonym: thiP" CDS complement(72911..74521) /gene="yabK" /locus_tag="b0067" /function="putative transport; Not classified" /note="thiamine transport protein (ABC superfamily, membrane); go_component: inner membrane [goid 0019866]; go_process: thiamin biosynthesis [goid 0009228]" /codon_start=1 /transl_table=11 /product="putative transport system permease protein" /protein_id="AAC73178.1" /db_xref="GI:1786254" /db_xref="ASAP:246" /translation="MATRRQPLIPGWLIPGVSATTLVVAVALAAFLALWWNAPQDDWV AVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLIL PVLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ ALENIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG GGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQ GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMPGIVLATGFFL LLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA VTALILLLLCFLLFTVIEKLPGRNVKTD" gene complement(74497..75480) /gene="tbpA" /locus_tag="b0068" /note="synonym: thiB" CDS complement(74497..75480) /gene="tbpA" /locus_tag="b0068" /function="putative transport; Transport of small molecules: Other" /note="thiamine transport protein (ABC superfamily, peri_bind); go_component: periplasmic space [goid 0042597]; go_process: thiamin biosynthesis [goid 0009228]" /codon_start=1 /transl_table=11 /product="thiamin-binding periplasmic protein" /protein_id="AAC73179.1" /db_xref="GI:1786255" /db_xref="ASAP:249" /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAF EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP TGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR" gene complement(75644..77299) /gene="yabN" /locus_tag="b0069" CDS complement(75644..77299) /gene="yabN" /locus_tag="b0069" /function="putative transport; Not classified" /note="putative periplasmic binding protein of transport system; go_component: periplasmic space [goid 0042597]" /codon_start=1 /transl_table=11 /product="putative transport protein" /protein_id="AAC73180.1" /db_xref="GI:1786256" /db_xref="ASAP:251" /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEE NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIA DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRN STNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEG CYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQWHTGEIES DIWLNSANFTLPLDFSVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA SKAMVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP" gene 77621..78799 /gene="setA" /locus_tag="b0070" /note="synonym: yabM" CDS 77621..78799 /gene="setA" /locus_tag="b0070" /function="putative transport; Not classified" /note="proton-coupled beta-galactosidase, lactose and glucose efflux pump (MFS family); go_component: inner membrane [goid 0019866]; go_function: lactose/glucose efflux transporter activity [goid 0015543]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="Sugar efflux protein" /protein_id="AAT48123.1" /db_xref="GI:48994875" /db_xref="ASAP:257" /translation="MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREV GAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRH YLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPL AFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVR MLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVK RYGKRRMMVIAVAAGVLFYTGLIFFNSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMP GRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV " gene complement(78848..79453) /gene="leuD" /locus_tag="b0071" CDS complement(78848..79453) /gene="leuD" /locus_tag="b0071" /EC_number="4.2.1.33" /function="enzyme; Amino acid biosynthesis: Leucine" /note="3-isopropylmalate isomerase, subunit with LeuC; go_component: cytoplasm [goid 0005737]; go_process: leucine biosynthesis [goid 0009098]" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase subunit" /protein_id="AAC73182.1" /db_xref="GI:1786258" /db_xref="ASAP:259" /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN" gene complement(79464..80864) /gene="leuC" /locus_tag="b0072" CDS complement(79464..80864) /gene="leuC" /locus_tag="b0072" /EC_number="4.2.1.33" /function="enzyme; Amino acid biosynthesis: Leucine" /note="3-isopropylmalate isomerase, subunit with LeuD; go_component: cytoplasm [goid 0005737]; go_process: leucine biosynthesis [goid 0009098]" /codon_start=1 /transl_table=11 /product="3-isopropylmalate isomerase (dehydratase) subunit" /protein_id="AAC73183.1" /db_xref="GI:1786259" /db_xref="ASAP:261" /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLD KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA AAAAVTGHFADIRNIK" gene complement(80867..81961) /gene="leuB" /locus_tag="b0073" CDS complement(80867..81961) /gene="leuB" /locus_tag="b0073" /EC_number="1.1.1.85" /function="enzyme; Amino acid biosynthesis: Leucine" /note="EcoGene suggests alternate start codon; go_component: cytoplasm [goid 0005737]; go_process: leucine biosynthesis [goid 0009098]" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="AAC73184.1" /db_xref="GI:1786260" /db_xref="ASAP:265" /translation="MMSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHY DVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKH FKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYE KAFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYP DVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQ GFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEG IRTGDLARGAAAVSTDEMGDIIARYVAEGV" gene complement(81958..83529) /gene="leuA" /locus_tag="b0074" CDS complement(81958..83529) /gene="leuA" /locus_tag="b0074" /EC_number="4.1.3.12" /function="enzyme; Amino acid biosynthesis: Leucine" /note="go_component: cytoplasm [goid 0005737]; go_process: leucine biosynthesis [goid 0009098]" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="AAC73185.1" /db_xref="GI:1786261" /db_xref="ASAP:267" /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITEYNVELVKYS LTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE LQRKAQHNENNKETV" gene complement(83622..83708) /gene="leuL" /locus_tag="b0075" CDS complement(83622..83708) /gene="leuL" /locus_tag="b0075" /function="leader; Amino acid biosynthesis: Leucine" /note="go_component: cytoplasm [goid 0005737]; go_process: leucine biosynthesis [goid 0009098]" /codon_start=1 /transl_table=11 /product="leu operon leader peptide" /protein_id="AAC73186.1" /db_xref="GI:1786263" /db_xref="ASAP:269" /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH" gene 84191..85312 /gene="leuO" /locus_tag="b0076" CDS 84191..85312 /gene="leuO" /locus_tag="b0076" /function="putative regulator; Amino acid biosynthesis: Leucine" /note="EcoGene suggests alternate start codon; putative transcriptional regulator of leucine biosynthesis (LysR family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_process: leucine biosynthesis [goid 0009098]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="probable transcriptional activator for leuABCD operon" /protein_id="AAC73187.1" /db_xref="GI:1786264" /db_xref="ASAP:280" /translation="MTHSTAMDSVFIRTRIFMFSEFYSFCFFLFYMHDKSYSSGLFLC IPIRERELSVTVELSMPEVQTDHPETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAA HVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELP GSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRY QETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLD RFASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQV LPLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR" gene 85540..87354 /gene="ilvI" /locus_tag="b0077" CDS 85540..87354 /gene="ilvI" /locus_tag="b0077" /EC_number="4.1.3.18" /function="enzyme; Amino acid biosynthesis: Isoleucine, Valine" /note="EcoGene suggests alternate start codon; acetolactate synthase III, valine-sensitive, large subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase III, valine sensitive, large subunit" /protein_id="AAC73188.1" /db_xref="GI:1786265" /db_xref="ASAP:290" /translation="MFMSLAANCLSKIGRLMCFTHFFRQTVRQAMEMLSGAEMVVRSL IDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADGLARATGEVGVVL VTSGPGATNAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVGISRPVVKHSF LVKQTEDIPQVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYVWPESVSMRSYNPT TTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVVCSLMGLGA FPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATVLHID IDPTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRARQC LKYDTHSEKIKPQAVIETLWRLTKGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGL GTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYL GMVKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVR NNRLVFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT" gene 87357..87848 /gene="ilvH" /locus_tag="b0078" /note="synonym: brnP" CDS 87357..87848 /gene="ilvH" /locus_tag="b0078" /EC_number="4.1.3.18" /function="enzyme; Amino acid biosynthesis: Isoleucine, Valine" /note="acetolactate synthase III, small subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase III, valine sensitive, small subunit" /protein_id="AAC73189.1" /db_xref="GI:1786266" /db_xref="ASAP:294" /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK RNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRGDK IMR" gene 87860..87946 /gene="fruL" /locus_tag="b0079" CDS 87860..87946 /gene="fruL" /locus_tag="b0079" /function="leader; Energy metabolism, carbon: Glycolysis" /note="go_process: glycolysis [goid 0006096]" /codon_start=1 /transl_table=11 /product="fruR leader peptide" /protein_id="AAC73190.1" /db_xref="GI:1786267" /db_xref="ASAP:297" /translation="MRNLQPNMSRWAFFAKSVGTWNKSSCRS" gene 88028..89032 /gene="fruR" /locus_tag="b0080" /note="synonyms: cra, fruC, shl" CDS 88028..89032 /gene="fruR" /locus_tag="b0080" /function="regulator; Energy metabolism, carbon: Glycolysis" /note="transcriptional regulator of the control of carbon and energy metabolism (GalR/LacI family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_function: transcriptional repressor activity [goid 0016564]; go_process: glycolysis [goid 0006096]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="transcriptional repressor of fru operon and others" /protein_id="AAC73191.1" /db_xref="GI:1786268" /db_xref="ASAP:299" /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVV GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS " gene 89634..90092 /gene="yabB" /locus_tag="b0081" /note="synonym: mraZ" CDS 89634..90092 /gene="yabB" /locus_tag="b0081" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73192.1" /db_xref="GI:1786269" /db_xref="ASAP:302" /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIYHPC LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL" gene 90094..91035 /gene="yabC" /locus_tag="b0082" /note="synonym: mraW" CDS 90094..91035 /gene="yabC" /locus_tag="b0082" /function="orf; Not classified" /note="S-adenosyl-dependent methyl transferase; go_process: lipoprotein biosynthesis [goid 0042158]" /codon_start=1 /transl_table=11 /product="putative apolipoprotein" /protein_id="AAC73193.1" /db_xref="GI:1786270" /db_xref="ASAP:304" /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA" gene 91032..91397 /gene="ftsL" /locus_tag="b0083" CDS 91032..91397 /gene="ftsL" /locus_tag="b0083" /function="phenotype; Cell division" /codon_start=1 /transl_table=11 /product="cell division protein; ingrowth of wall at septum" /protein_id="AAC73194.1" /db_xref="GI:1786271" /db_xref="ASAP:306" /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT EKLQMQHVDPSQENIVVQK" gene 91413..93179 /gene="ftsI" /locus_tag="b0084" /note="synonyms: pbpB, sep" CDS 91413..93179 /gene="ftsI" /locus_tag="b0084" /function="enzyme; Cell division" /note="division-specific transpeptidase, penicillin-binding protein 3; go_component: inner membrane [goid 0019866]; go_process: peptidoglycan biosynthesis [goid 0009252]; go_process: response to drug [goid 0042493]" /codon_start=1 /transl_table=11 /product="septum formation; penicillin-binding protein 3; peptidoglycan synthetase" /protein_id="AAC73195.1" /db_xref="GI:1786272" /db_xref="ASAP:309" /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD ALTTGDKNEFVINQGEGTGGRS" gene 93166..94653 /gene="murE" /locus_tag="b0085" CDS 93166..94653 /gene="murE" /locus_tag="b0085" /EC_number="6.3.2.13" /function="enzyme; Murein sacculus, peptidoglycan" /note="UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase; go_process: peptidoglycan biosynthesis [goid 0009252]" /codon_start=1 /transl_table=11 /product="meso-diaminopimelate-adding enzyme" /protein_id="AAC73196.1" /db_xref="GI:1786273" /db_xref="ASAP:311" /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTENTTG SAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKA TEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLALATLLALGYPLADLLKTAA RLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA" gene 94650..96008 /gene="murF" /locus_tag="b0086" /note="synonym: mra" CDS 94650..96008 /gene="murF" /locus_tag="b0086" /EC_number="6.3.2.15" /function="enzyme; Murein sacculus, peptidoglycan" /note="go_component: cytoplasm [goid 0005737]; go_process: peptidoglycan biosynthesis [goid 0009252]; go_process: peptidoglycan metabolism [goid 0000270]" /codon_start=1 /transl_table=11 /product="D-alanine:D-alanine-adding enzyme" /protein_id="AAC73197.1" /db_xref="GI:1786274" /db_xref="ASAP:313" /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK QSHAISTASGVGEHFADKTALITRLKLLIAEQQVITILVKGSRSAAMEEVVRALQENG TC" gene 96002..97084 /gene="mraY" /locus_tag="b0087" CDS 96002..97084 /gene="mraY" /locus_tag="b0087" /EC_number="2.7.8.13" /function="enzyme; Murein sacculus, peptidoglycan" /note="phospho-N-acetylmuramoyl-pentapeptide transferase; go_component: inner membrane [goid 0019866]; go_process: peptidoglycan biosynthesis [goid 0009252]" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide transferase?" /protein_id="AAC73198.1" /db_xref="GI:1786275" /db_xref="ASAP:316" /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP EPRVIVRFWIISLMLVLIGLATLKVR" gene 97087..98403 /gene="murD" /locus_tag="b0088" CDS 97087..98403 /gene="murD" /locus_tag="b0088" /EC_number="6.3.2.9" /function="enzyme; Murein sacculus, peptidoglycan" /note="go_component: cytoplasm [goid 0005737]; go_process: peptidoglycan biosynthesis [goid 0009252]" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanine-D-glutamate ligase" /protein_id="AAC73199.1" /db_xref="GI:1786276" /db_xref="ASAP:318" /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELS SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL HVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG" gene 98403..99647 /gene="ftsW" /locus_tag="b0089" CDS 98403..99647 /gene="ftsW" /locus_tag="b0089" /function="membrane; Cell division" /note="essential cell division gene, stablilzes FtsZ ring, required for PBP2 expression; go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="cell division; membrane protein involved in shape determination" /protein_id="AAC73200.1" /db_xref="GI:1786277" /db_xref="ASAP:320" /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAK LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM MLLRIDYETRLEKAQAFVRGSR" gene 99644..100711 /gene="murG" /locus_tag="b0090" CDS 99644..100711 /gene="murG" /locus_tag="b0090" /EC_number="2.4.1.-" /function="enzyme; Murein sacculus, peptidoglycan" /note="UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; go_component: inner membrane [goid 0019866]; go_process: peptidoglycan biosynthesis [goid 0009252]" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase" /protein_id="AAC73201.1" /db_xref="GI:1786278" /db_xref="ASAP:322" /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR AASIPDATERVANEVSRVARA" gene 100765..102240 /gene="murC" /locus_tag="b0091" CDS 100765..102240 /gene="murC" /locus_tag="b0091" /EC_number="6.3.2.8" /function="enzyme; Murein sacculus, peptidoglycan" /note="UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme; go_process: peptidoglycan biosynthesis [goid 0009252]" /codon_start=1 /transl_table=11 /product="L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase" /protein_id="AAC73202.1" /db_xref="GI:1786279" /db_xref="ASAP:324" /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEF PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPARVAEML APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD" gene 102233..103153 /gene="ddlB" /locus_tag="b0092" /note="synonym: ddl" CDS 102233..103153 /gene="ddlB" /locus_tag="b0092" /EC_number="6.3.2.4" /function="enzyme; Murein sacculus, peptidoglycan" /note="go_component: cytoplasm [goid 0005737]; go_process: peptidoglycan biosynthesis [goid 0009252]" /codon_start=1 /transl_table=11 /product="D-alanine-D-alanine ligase B, affects cell division" /protein_id="AAC73203.1" /db_xref="GI:1786280" /db_xref="ASAP:326" /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKL LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS DETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG MTSHSLVPMAARQAGMSFSQLVVRILELAD" gene 103155..103985 /gene="ftsQ" /locus_tag="b0093" CDS 103155..103985 /gene="ftsQ" /locus_tag="b0093" /function="phenotype; Cell division" /note="go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="cell division protein; ingrowth of wall at septum" /protein_id="AAC73204.1" /db_xref="GI:1786281" /db_xref="ASAP:329" /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPERTSKQVLPML YGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMK RLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ " gene 103982..105244 /gene="ftsA" /locus_tag="b0094" /note="synonym: divA" CDS 103982..105244 /gene="ftsA" /locus_tag="b0094" /function="phenotype; Cell division" /note="ATP-binding cell division protein, septation process, complexes with FtsZ; go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes" /protein_id="AAC73205.1" /db_xref="GI:1786282" /db_xref="ASAP:331" /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN GEAEVEKRVTASVGSWIKRLNSWLRKEF" gene 105305..106456 /gene="ftsZ" /locus_tag="b0095" /note="synonyms: sfiB, sulB" CDS 105305..106456 /gene="ftsZ" /locus_tag="b0095" /function="enzyme; Cell division" /note="tubulin-like GTP-binding protein and GTPase, forms circumferential ring in cell division; go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase" /protein_id="AAC73206.1" /db_xref="GI:1786284" /db_xref="ASAP:333" /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD" gene 106557..107474 /gene="lpxC" /locus_tag="b0096" /note="synonyms: asmA, envA" CDS 106557..107474 /gene="lpxC" /locus_tag="b0096" /function="enzyme; Surface polysaccharides & antigens" /note="UDP-3-O-acyl N-acetylglucosamine deacetylase; go_component: cytoplasm [goid 0005737]; go_function: cell surface antigen activity, host-interacting [goid 0042280]; go_process: lipid A biosynthesis [goid 0009245]" /codon_start=1 /transl_table=11 /product="UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis" /protein_id="AAC73207.1" /db_xref="GI:1786285" /db_xref="ASAP:336" /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVL AKQEAWEYVTFQDDAELPLAFKAPSAVLA" gene 107630..108217 /gene="yacA" /locus_tag="b0097" /note="synonym: secM" CDS 107630..108217 /gene="yacA" /locus_tag="b0097" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; secretion monitor, regulator of secA translation (General Secretory Pathway)" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73208.1" /db_xref="GI:1786286" /db_xref="ASAP:340" /translation="MLWTAGFNDKICALNTFEYDRDGNNVSGILTRWRQFGKRYFWPH LLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYS VDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEK GYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT" gene 108279..110984 /gene="secA" /locus_tag="b0098" /note="synonyms: azi, pea, prlD" CDS 108279..110984 /gene="secA" /locus_tag="b0098" /function="transport; Protein, peptide secretion" /note="preprotein translocase, ATPase secretion component (General Secretory Pathway); go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="preprotein translocase; secretion protein" /protein_id="AAC73209.1" /db_xref="GI:1786287" /db_xref="ASAP:343" /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ" gene 111044..111433 /gene="mutT" /locus_tag="b0099" CDS 111044..111433 /gene="mutT" /locus_tag="b0099" /EC_number="3.6.1.-" /function="enzyme; 2'-Deoxyribonucleotide metabolism" /note="7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP; go_component: cytoplasm [goid 0005737]; go_process: 2'-deoxyribonucleotide biosynthesis [goid 0009265]" /codon_start=1 /transl_table=11 /product="7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions" /protein_id="AAC73210.1" /db_xref="GI:1786288" /db_xref="ASAP:346" /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE TPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVERWEGEPWGKEGQPG EWMSLVGLNADDFPPANEPVIAKLKRL" gene complement(111564..111698) /locus_tag="b0100" CDS complement(111564..111698) /locus_tag="b0100" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73211.1" /db_xref="GI:1786289" /db_xref="ASAP:349" /translation="MAIFPKAMTGAKNQSSDICLMPHVGLIRRGQRRIRHLVQMSDAA " gene complement(111649..111846) /gene="yacG" /locus_tag="b0101" CDS complement(111649..111846) /gene="yacG" /locus_tag="b0101" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73212.1" /db_xref="GI:1786290" /db_xref="ASAP:351" /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE KRIPSSGDLSESDDWSEEPKQ" gene complement(111856..112599) /gene="yacF" /locus_tag="b0102" CDS complement(111856..112599) /gene="yacF" /locus_tag="b0102" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73213.1" /db_xref="GI:1786291" /db_xref="ASAP:355" /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH KSRFAIRFMPLDTENGQVPERLDFELACC" gene complement(112599..113219) /gene="yacE" /locus_tag="b0103" /note="synonym: coaE" CDS complement(112599..113219) /gene="yacE" /locus_tag="b0103" /EC_number="2.7.1.24" /function="orf; Not classified" /note="dephospho-CoA kinase" /codon_start=1 /transl_table=11 /product="putative DNA repair protein" /protein_id="AAC73214.1" /db_xref="GI:1786292" /db_xref="ASAP:357" /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP" gene 113444..114487 /gene="guaC" /locus_tag="b0104" CDS 113444..114487 /gene="guaC" /locus_tag="b0104" /EC_number="1.6.6.8" /function="enzyme; Purine ribonucleotide biosynthesis" /note="go_component: cytoplasm [goid 0005737]; go_process: purine ribonucleotide biosynthesis [goid 0009152]; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="GMP reductase" /protein_id="AAC73215.1" /db_xref="GI:1786293" /db_xref="ASAP:362" /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSW SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI RVQEQENRIFNNL" gene complement(114407..114514) /locus_tag="b0105" CDS complement(114407..114514) /locus_tag="b0105" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73216.1" /db_xref="GI:1786294" /db_xref="ASAP:364" /translation="MLLHASVGRLQVVEDAVFLFLHTNKRGALGQLFQA" gene complement(114522..115724) /gene="hofC" /locus_tag="b0106" /note="synonym: hopC" CDS complement(114522..115724) /gene="hofC" /locus_tag="b0106" /function="putative transport; Not classified" /note="component in type IV pilin biogenesis, transmembrane protein; go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake" /protein_id="AAC73217.1" /db_xref="GI:1786295" /db_xref="ASAP:366" /translation="MASKQLWRWHGITGDGNAQDGMLWAESRTLLLMALQQQMVTPLS LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAH DLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVK SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSW LLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGQPIWLALKNTGEFSPLCLQLVRTG EASGSLDLMLDNLAHHHRENTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL GDAMSGMG" gene complement(115714..117099) /gene="hofB" /locus_tag="b0107" /note="synonym: hopB" CDS complement(115714..117099) /gene="hofB" /locus_tag="b0107" /function="putative transport; Not classified" /note="putative integral membrane protein involved in biogenesis of fimbriae (type IV pilin), protein transport, DNA uptake; go_component: fimbria [goid 0009289]" /codon_start=1 /transl_table=11 /product="putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake" /protein_id="AAC73218.1" /db_xref="GI:1786296" /db_xref="ASAP:370" /translation="MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFA TTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHI EPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVEL AGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLV LVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGV LRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVA RWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGF YGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEE LIRVLGMPHGE" gene complement(117109..117549) /gene="ppdD" /locus_tag="b0108" CDS complement(117109..117549) /gene="ppdD" /locus_tag="b0108" /function="putative enzyme; Not classified" /note="putative major component of type IV pilin, prelipin peptidase-dependent protein; go_component: fimbria [goid 0009289]" /codon_start=1 /transl_table=11 /product="prelipin peptidase dependent protein" /protein_id="AAC73219.1" /db_xref="GI:1786297" /db_xref="ASAP:372" /translation="MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ TFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNG LSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN" gene complement(117752..118645) /gene="nadC" /locus_tag="b0109" /note="synonym: nic" CDS complement(117752..118645) /gene="nadC" /locus_tag="b0109" /EC_number="2.4.2.19" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /note="go_process: nicotinamide adenine dinucleotide biosynthesis [goid 0009435]" /codon_start=1 /transl_table=11 /product="quinolinate phosphoribosyltransferase" /protein_id="AAC73220.1" /db_xref="GI:1786299" /db_xref="ASAP:374" /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ SLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD FISVGALTKHVQALDLSMRFR" gene 118733..119284 /gene="ampD" /locus_tag="b0110" CDS 118733..119284 /gene="ampD" /locus_tag="b0110" /function="regulator; Not classified" /note="N-acetyl-anhydromuramyl-L-alanine amidase; go_component: cytoplasm [goid 0005737]; go_process: peptidoglycan metabolism [goid 0000270]" /codon_start=1 /transl_table=11 /product="regulates ampC" /protein_id="AAC73221.1" /db_xref="GI:1786300" /db_xref="ASAP:380" /translation="MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPD RKTDPGPAFDWARFRVLVSKETT" gene 119281..120135 /gene="ampE" /locus_tag="b0111" CDS 119281..120135 /gene="ampE" /locus_tag="b0111" /function="regulator; Drug/analog sensitivity" /note="putative transmembrane protein, putative protease; go_component: inner membrane [goid 0019866]; go_process: response to drug [goid 0042493]" /codon_start=1 /transl_table=11 /product="regulates ampC" /protein_id="AAC73222.1" /db_xref="GI:1786301" /db_xref="ASAP:382" /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND SHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPV TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL LTIYGALV" gene complement(120178..121551) /gene="aroP" /locus_tag="b0112" CDS complement(120178..121551) /gene="aroP" /locus_tag="b0112" /function="transport; Transport of small molecules: Amino acids, amines" /note="aromatic amino acid transport protein (APC family); go_component: inner membrane [goid 0019866]; go_process: L-phenylalanine biosynthesis [goid 0009094]; go_process: tyrosine biosynthesis [goid 0006571]" /codon_start=1 /transl_table=11 /product="aromatic amino acid transport protein" /protein_id="AAC73223.1" /db_xref="GI:1786302" /db_xref="ASAP:384" /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK VIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT AKAVKAH" gene 122092..122856 /gene="pdhR" /locus_tag="b0113" CDS 122092..122856 /gene="pdhR" /locus_tag="b0113" /function="regulator; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="transcriptional repressor for pyruvate dehydrogenase complex (GntR family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional repressor activity [goid 0016564]; go_process: glycolysis [goid 0006096]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="transcriptional regulator for pyruvate dehydrogenase complex" /protein_id="AAC73224.1" /db_xref="GI:1786303" /db_xref="ASAP:394" /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN" gene 123017..125680 /gene="aceE" /locus_tag="b0114" /note="synonym: aceE1" CDS 123017..125680 /gene="aceE" /locus_tag="b0114" /EC_number="1.2.4.1" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="pyruvate dehydrogenase, decarboxylase subunit, thiamin-binding; go_process: carbohydrate catabolism [goid 0016052]; go_process: acetyl-CoA biosynthesis from pyruvate [goid 0006086]; go_process: glycolysis [goid 0006096]; go_process: glyoxylate catabolism [goid 0009436]; go_process: anaerobic respiration [goid 0009061]" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase (decarboxylase component)" /protein_id="AAC73225.1" /db_xref="GI:1786304" /db_xref="ASAP:397" /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTI KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE LAKRGEIDKKVVADAIAKFNIDADKVNPRLA" gene 125695..127587 /gene="aceF" /locus_tag="b0115" /note="synonym: aceE2" CDS 125695..127587 /gene="aceF" /locus_tag="b0115" /EC_number="2.3.1.12" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit; go_process: carbohydrate catabolism [goid 0016052]; go_process: acetyl-CoA biosynthesis from pyruvate [goid 0006086]; go_process: glycolysis [goid 0006096]; go_process: glyoxylate catabolism [goid 0009436]; go_process: anaerobic respiration [goid 0009061]" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase (dihydrolipoyltransacetylase component)" /protein_id="AAC73226.1" /db_xref="GI:1786305" /db_xref="ASAP:400" /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD IRRLVM" gene 127912..129336 /gene="lpdA" /locus_tag="b0116" CDS 127912..129336 /gene="lpdA" /locus_tag="b0116" /EC_number="1.8.1.4" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes; go_component: cytoplasm [goid 0005737]; go_process: carbohydrate catabolism [goid 0016052]; go_process: amino acid catabolism [goid 0009063]; go_process: glycolysis [goid 0006096]; go_process: acetyl-CoA biosynthesis from pyruvate [goid 0006086]; go_process: tricarboxylic acid cycle [goid 0006099]; go_process: aerobic respiration [goid 0009060]; go_process: anaerobic respiration [goid 0009061]; go_process: 10-formyltetrahydrofolate biosynthesis [goid 0009257]; go_process: glyoxylate catabolism [goid 0009436]" /codon_start=1 /transl_table=11 /product="lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex" /protein_id="AAC73227.1" /db_xref="GI:1786307" /db_xref="ASAP:404" /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE SVGLAAEVFEGSITDLPNPKAKKK" gene complement(129407..131260) /gene="yacH" /locus_tag="b0117" CDS complement(129407..131260) /gene="yacH" /locus_tag="b0117" /function="putative membrane; Not classified" /codon_start=1 /transl_table=11 /product="putative membrane protein" /protein_id="AAC73228.1" /db_xref="GI:1786308" /db_xref="ASAP:406" /translation="MKMTLPFKPHVLALICSAGLCAASTGLYIKSRTVEAPVEPQSTQ LAVSDAAAVTFPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTY PTNVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKVITTTKKAVPVKQTVTAPVIPSN TVLTANPVITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEP FVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDNDDYHHHDGGHRDGNGWQHN GDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSA TQLPAPTRDSQRQAAANQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFHDFS RRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPKIQQRREAARERIQSASPEQRQ AVREKMQTNPQNQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSA SPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVCERLSERGARRLER" gene 131615..134212 /gene="acnB" /locus_tag="b0118" CDS 131615..134212 /gene="acnB" /locus_tag="b0118" /EC_number="4.2.1.3" /function="enzyme; Energy metabolism, carbon: TCA cycle" /note="aconitate hydratase 2; go_process: tricarboxylic acid cycle [goid 0006099]; go_process: aerobic respiration [goid 0009060]; go_process: anaerobic respiration [goid 0009061]" /codon_start=1 /transl_table=11 /product="aconitate hydrase B" /protein_id="AAC73229.1" /db_xref="GI:2367097" /db_xref="ASAP:411" /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF LLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRP ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRA CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA DGVIFQTAV" gene 134340..134750 /gene="yacL" /locus_tag="b0119" CDS 134340..134750 /gene="yacL" /locus_tag="b0119" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73230.1" /db_xref="GI:1786310" /db_xref="ASAP:414" /translation="MAQCDFGALPGAEEHTMDYEFLRDITGVVKVRMSMGHEVVGHWF NEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEM EEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK" gene complement(134788..135582) /gene="speD" /locus_tag="b0120" CDS complement(134788..135582) /gene="speD" /locus_tag="b0120" /EC_number="4.1.1.50" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /note="S-adenosylmethionine decarboxylase, proenzyme; go_process: polyamine biosynthesis [goid 0006596]" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine decarboxylase" /protein_id="AAC73231.1" /db_xref="GI:1786311" /db_xref="ASAP:416" /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV" gene complement(135598..136464) /gene="speE" /locus_tag="b0121" CDS complement(135598..136464) /gene="speE" /locus_tag="b0121" /EC_number="2.5.1.16" /function="enzyme; Central intermediary metabolism: Polyamine biosynthesis" /note="spermidine synthase (putrescine aminopropyltransferase); go_process: polyamine biosynthesis [goid 0006596]" /codon_start=1 /transl_table=11 /product="spermidine synthase = putrescine aminopropyltransferase" /protein_id="AAC73232.1" /db_xref="GI:1786312" /db_xref="ASAP:418" /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF YQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP QYLQDALASQPS" gene complement(136570..137040) /gene="yacC" /locus_tag="b0122" CDS complement(136570..137040) /gene="yacC" /locus_tag="b0122" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73233.1" /db_xref="GI:1786313" /db_xref="ASAP:423" /translation="MSIVLPLTGRSSRRHNLIDNNGRRLARSVLTFIFFKPLVEAMKT FFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVF FAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK" gene 137083..138633 /gene="cueO" /locus_tag="b0123" /note="synonym: yacK" CDS 137083..138633 /gene="cueO" /locus_tag="b0123" /function="orf; Unknown" /note="multicopper oxidase" /codon_start=1 /transl_table=11 /product="Probable periplasmic copper oxidase" /protein_id="AAC73234.1" /db_xref="GI:1786314" /db_xref="ASAP:430" /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA RNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW HGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV VIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT GMMLGFTV" gene complement(138835..141225) /gene="gcd" /locus_tag="b0124" CDS complement(138835..141225) /gene="gcd" /locus_tag="b0124" /EC_number="1.1.99.17" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="glucose dehydrogenase, transmembrane domain (N-terminal); catalytic periplasmic domain (C-terminal); go_component: inner membrane [goid 0019866]; go_function: electron donor activity [goid 0009053]; go_process: glucose metabolism [goid 0006006]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="glucose dehydrogenase" /protein_id="AAC73235.1" /db_xref="GI:1786316" /db_xref="ASAP:433" /translation="MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYP IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI WLILPFVWRRLVIPASGAVAALVVALLISGGILTWAGFNDPQEINGTLSADATPAEAI SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAE TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD EHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQM RYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGN PMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEV VWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSN GEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK" gene 141419..141967 /gene="hpt" /locus_tag="b0125" CDS 141419..141967 /gene="hpt" /locus_tag="b0125" /EC_number="2.4.2.8" /function="enzyme; Salvage of nucleosides and nucleotides" /note="EcoGene suggests alternate start codon; go_component: cytoplasm [goid 0005737]; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="hypoxanthine phosphoribosyltransferase" /protein_id="AAC73236.1" /db_xref="GI:1786317" /db_xref="ASAP:440" /translation="MVRDMKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVG LLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIV EDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGY GIDYAQRYRHLPYIGKVILLDE" gene complement(142008..142670) /gene="yadF" /locus_tag="b0126" CDS complement(142008..142670) /gene="yadF" /locus_tag="b0126" /function="putative enzyme; Not classified" /note="putative carbonic anhydrase" /codon_start=1 /transl_table=11 /product="putative carbonic anhdrase (EC 4.2.1.1)" /protein_id="AAC73237.1" /db_xref="GI:1786318" /db_xref="ASAP:442" /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSD SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN HK" gene 142779..143705 /gene="yadG" /locus_tag="b0127" CDS 142779..143705 /gene="yadG" /locus_tag="b0127" /function="putative transport; Not classified" /note="putative transport protein (ABC superfamily, atp_bind); go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="putative ATP-binding component of a transport system" /protein_id="AAC73238.1" /db_xref="GI:1786319" /db_xref="ASAP:447" /translation="MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT SMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA" gene 143702..144472 /gene="yadH" /locus_tag="b0128" CDS 143702..144472 /gene="yadH" /locus_tag="b0128" /function="orf; Unknown" /note="putative transport protein (ABC superfamily, membrane); go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73239.1" /db_xref="GI:1786320" /db_xref="ASAP:450" /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF LGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS" gene 144577..145017 /gene="yadI" /locus_tag="b0129" CDS 144577..145017 /gene="yadI" /locus_tag="b0129" /function="putative transport; Not classified" /note="putative PTS family enzyme IIA component; go_process: phosphoenolpyruvate-dependent sugar phosphotransferase system [goid 0009401]" /codon_start=1 /transl_table=11 /product="putative PTS enzyme II B component" /protein_id="AAC73240.1" /db_xref="GI:1786321" /db_xref="ASAP:453" /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA CRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY" gene 145081..146310 /gene="yadE" /locus_tag="b0130" CDS 145081..146310 /gene="yadE" /locus_tag="b0130" /function="orf; Unknown" /codon_start=1 /transl_table=11 /product="conserved hypothetical protein" /protein_id="AAC73241.1" /db_xref="GI:1786322" /db_xref="ASAP:457" /translation="MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVT VGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSN QNLVTWKDTPVYNAPSAGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS ALDAQPDNGLSVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMVQ LEGYVKNKINLPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKW NPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRA LAQFNPHVWYLSYPFGGFNDNAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILR TDSLETMSRLVSNQPQG" gene complement(146314..146694) /gene="panD" /locus_tag="b0131" CDS complement(146314..146694) /gene="panD" /locus_tag="b0131" /EC_number="4.1.1.11" /function="enzyme; Biosynthesis of cofactors, carriers: Pantothenate" /note="go_component: cytoplasm [goid 0005737]; go_process: coenzyme A biosynthesis [goid 0015937]" /codon_start=1 /transl_table=11 /product="aspartate 1-decarboxylase" /protein_id="AAC73242.1" /db_xref="GI:1786323" /db_xref="ASAP:459" /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR PNVAYFEGDNEMKRTAKAIPVQVA" gene 146968..147870 /gene="yadD" /locus_tag="b0132" CDS 146968..147870 /gene="yadD" /locus_tag="b0132" /function="orf; Unknown" /note="putative transposase" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73243.1" /db_xref="GI:1786324" /db_xref="ASAP:463" /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAM HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR GHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEVSQEFAQRLLSKG MSREDVAEMANLPLAEIDKVINLI" gene complement(147944..148795) /gene="panC" /locus_tag="b0133" CDS complement(147944..148795) /gene="panC" /locus_tag="b0133" /EC_number="6.3.2.1" /function="enzyme; Biosynthesis of cofactors, carriers: Pantothenate" /note="go_component: cytoplasm [goid 0005737]; go_process: coenzyme A biosynthesis [goid 0015937]" /codon_start=1 /transl_table=11 /product="pantothenate synthetase" /protein_id="AAC73244.1" /db_xref="GI:1786325" /db_xref="ASAP:465" /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG ERDLDEIITIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID NKMVELA" gene complement(148807..149601) /gene="panB" /locus_tag="b0134" CDS complement(148807..149601) /gene="panB" /locus_tag="b0134" /EC_number="2.1.2.11" /function="enzyme; Biosynthesis of cofactors, carriers: Pantothenate" /note="go_component: cytoplasm [goid 0005737]; go_process: coenzyme A biosynthesis [goid 0015937]" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /protein_id="AAC73245.1" /db_xref="GI:1786326" /db_xref="ASAP:467" /translation="MKPTTISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVG DSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAAT VMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH" gene complement(149715..150953) /gene="yadC" /locus_tag="b0135" CDS complement(149715..150953) /gene="yadC" /locus_tag="b0135" /function="putative structure; Not classified" /note="go_component: fimbria [goid 0009289]" /codon_start=1 /transl_table=11 /product="putative fimbrial-like protein" /protein_id="AAC73246.1" /db_xref="GI:1786328" /db_xref="ASAP:470" /translation="MKTIFRYILFLALYSCCNTVSAYTSFIVGNNAGVDNYRGPSTAA QMTFNYTSTASNLVFYKPTQLGPTGVKMYWSYLDTGTGGGILYCNTSGRANPGPITIE NAMVYSGKDYGGHKLFNTSVPGLYYTMLISRVWSAYDTITDIQSPGIYIGDPSNQEFF FSVTDSDLQTKGCNKADDYDKFWAIGGIVHNITVEFYTDTNFDPTLNQQVQLSSSSNY LYSFKAYSPGTKVVDHSNHIYVNFTLNNVKLTLPTCFTSILTGPSVNGSTVRMGEYSS GTIKNGASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNTLTGSTAAKGVGVL IEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDG NIAIEPGEFKATSTFQVTYP" gene complement(151003..151599) /gene="yadK" /locus_tag="b0136" CDS complement(151003..151599) /gene="yadK" /locus_tag="b0136" /function="orf; Not classified" /note="putative adhesin-like protein" /codon_start=1 /transl_table=11 /product="putative fimbrial protein" /protein_id="AAC73247.1" /db_xref="GI:1786329" /db_xref="ASAP:472" /translation="MHPTQRKLMKRIILFLSLLFCIACPAIAGQDIDLVANVKNSTCK SGISNQGNIDLGVVGVGYFSGNVTPESYQPGGKEFTITVSDCALQGTGDVLNQLHIDF RALSGVMAAGSRQIFANEISSGASNVGVVIFSTQDSANTFNVLNASGGSRSVYPVMSD DMNGSSWKFSTRMQKIDPALSVTSGQLMSHVLVDIYYE" gene complement(151626..152231) /gene="yadL" /locus_tag="b0137" CDS complement(151626..152231) /gene="yadL" /locus_tag="b0137" /function="orf; Not classified" /note="putative adhesin-like protein" /codon_start=1 /transl_table=11 /product="putative fimbrial protein" /protein_id="AAC73248.1" /db_xref="GI:1786330" /db_xref="ASAP:475" /translation="MMTFKNLRYGLSSSVVLAASLFSVLSYAATDSIGLTVITTVEMG TCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKR ATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTIST AANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN" gene complement(152243..152854) /gene="yadM" /locus_tag="b0138" CDS complement(152243..152854) /gene="yadM" /locus_tag="b0138" /function="putative structure; Not classified" /note="EcoGene suggests alternate start codon; go_component: fimbria [goid 0009289]" /codon_start=1 /transl_table=11 /product="putative fimbrial-like protein" /protein_id="AAC73249.1" /db_xref="GI:1786331" /db_xref="ASAP:477" /translation="MEFGVRFSNYKGRQMIKTTPHKIVILMGILLSPSVFATDINVEF TATVKATTCNITLTGNNVTNDGNNNYTLRIPKMGLDKIANKTTESQADFKLVASGCSS GISWIDTTLTGNASSSSPKLIIPQSGDSSSTTSNIGMGFKKRTTDDATFLKPNSAEKI RWSTDEMQPDKGLEMTVALRETDAGQGVPGNFRALATFNFIYQ" gene complement(152829..155426) /gene="htrE" /locus_tag="b0139" CDS complement(152829..155426) /gene="htrE" /locus_tag="b0139" /function="putative membrane; Surface structures" /note="putative outer membrane porin involved in fimbrial assembly; go_component: external outer membrane (sensu Gram-negative Bacteria) [goid 0009279]" /codon_start=1 /transl_table=11 /product="probable outer membrane porin protein involved in fimbrial assembly" /protein_id="AAC73250.1" /db_xref="GI:1786332" /db_xref="ASAP:479" /translation="MTIEYTKNYHHLTRIATFCALLYCNTAFSAELVEYDHTFLMGQN ASNIDLSRYSEGNPAIPGVYDVSVYVNDQPIINQSITFVAIEGKKNAQACITLKNLLQ FHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNDQRLDIDVPQAWVMKN YQNYVDPSLWENGINAAMLSYNLNGYHSETPGRKNESIYAAFNGGMNLGAWRLRASGN YNWMTDSGSNYDFKNRYVQRDIASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRML PPTLASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTI EESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNY LTGYTGIQITDNNYTAGLLGLGLNTSVGAFSFDVTHSNVRIPDDKTYQGQSYRVSWNK LFEETSTSLNIAAYRYSTQNYLGLNDALTLIDEVKHPEQDLEPKSMRNYSRMKNQVTV SINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSTSWGSYSVSAQRSWNE DGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQISSDFKGNNQLNVSSSGYSDNAR VSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLAGSISANSDNSRQVSLSTDGGFVL HSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNSTIDRWGYGVTSALSPYHENRIA LDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNIPFAADIY DEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEQSKPVSCLAHYQQSPEAEKIAQSII LNGIRCQIQ" gene complement(155461..156201) /gene="ecpD" /locus_tag="b0140" CDS complement(155461..156201) /gene="ecpD" /locus_tag="b0140" /function="putative factor; Surface structures" /note="putative periplasmic pilin chaperone similar to PapD; go_component: inner membrane [goid 0019866]; go_process: protein folding [goid 0006457]" /codon_start=1 /transl_table=11 /product="probable pilin chaperone similar to PapD" /protein_id="AAC73251.1" /db_xref="GI:1786333" /db_xref="ASAP:482" /translation="MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVN VRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTAST SLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL ALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVNG LNGKANSAKVHFYAINDFGGAIEGNARL" gene complement(156299..156883) /gene="yadN" /locus_tag="b0141" CDS complement(156299..156883) /gene="yadN" /locus_tag="b0141" /function="putative structure; Not classified" /note="go_component: fimbria [goid 0009289]" /codon_start=1 /transl_table=11 /product="putative fimbrial-like protein" /protein_id="AAC73252.1" /db_xref="GI:1786334" /db_xref="ASAP:487" /translation="MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETR VDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFG SVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKS AVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ" gene complement(157253..157732) /gene="folK" /locus_tag="b0142" CDS complement(157253..157732) /gene="folK" /locus_tag="b0142" /EC_number="2.7.6.3" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /note="7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, PPPK; go_process: folic acid biosynthesis [goid 0046656]" /codon_start=1 /transl_table=11 /product="7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase" /protein_id="AAC73253.1" /db_xref="GI:1786335" /db_xref="ASAP:491" /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTP PLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLF GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW" gene complement(157729..159093) /gene="pcnB" /locus_tag="b0143" CDS complement(157729..159093) /gene="pcnB" /locus_tag="b0143" /EC_number="2.7.7.19" /function="enzyme; RNA synthesis, modification, DNA transcription" /note="EcoGene suggests alternate start codon; go_component: cytoplasm [goid 0005737]; go_process: RNA modification [goid 0009451]" /codon_start=1 /transl_table=11 /product="poly(A) polymerase I" /protein_id="AAC73254.1" /db_xref="GI:1786336" /db_xref="ASAP:493" /translation="MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRL NKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMF GPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYS VADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAE PIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENG DSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAF ALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDL LALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRRPRKRAPRR EGTA" gene complement(159186..160112) /gene="yadB" /locus_tag="b0144" CDS complement(159186..160112) /gene="yadB" /locus_tag="b0144" /function="putative enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="EcoGene suggests alternate start codon; putative glutamyl t-RNA synthetase; go_process: amino acid activation [goid 0006418]" /codon_start=1 /transl_table=11 /product="putative tRNA synthetase" /protein_id="AAC73255.1" /db_xref="GI:1786337" /db_xref="ASAP:497" /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL HEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFS VEQILQSAVKNWRLTAVPESAIVNSTFSNASC" gene complement(160149..160604) /gene="dksA" /locus_tag="b0145" /note="synonym: msmA" CDS complement(160149..160604) /gene="dksA" /locus_tag="b0145" /function="phenotype; DNA - replication, repair, restriction/modification" /note="go_component: cytoplasm [goid 0005737]; go_process: protein folding [goid 0006457]" /codon_start=1 /transl_table=11 /product="dnaK suppressor protein" /protein_id="AAC73256.1" /db_xref="GI:1786338" /db_xref="ASAP:499" /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG" gene complement(160782..161486) /gene="sfsA" /locus_tag="b0146" /note="synonym: sfs1" CDS complement(160782..161486) /gene="sfsA" /locus_tag="b0146" /function="putative regulator; Degradation of small molecules: Carbon compounds" /note="transcriptional regulator of maltose metabolism; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="probable regulator for maltose metabolism" /protein_id="AAC73257.1" /db_xref="GI:1786340" /db_xref="ASAP:503" /translation="MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC ATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH LRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE ISAEGMALKKSLPVTL" gene complement(161501..162040) /gene="ligT" /locus_tag="b0147" /note="synonym: yadP" CDS complement(161501..162040) /gene="ligT" /locus_tag="b0147" /EC_number="6.5.1.-" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; go_component: cytosolic ribosome (sensu Bacteria) [goid 0009281]; go_component: cytoplasm [goid 0005737]; go_process: RNA modification [goid 0009451]" /codon_start=1 /transl_table=11 /product="2'-5' RNA ligase" /protein_id="AAC73258.1" /db_xref="GI:1786341" /db_xref="ASAP:505" /translation="MPHMSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADN LHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGL IQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYAS SFARGRTRYTPLKRWALTQ" gene 162060..164534 /gene="hrpB" /locus_tag="b0148" CDS 162060..164534 /gene="hrpB" /locus_tag="b0148" /function="enzyme; DNA - replication, repair, restriction/modification" /note="EcoGene suggests alternate start codon; go_component: cytoplasm [goid 0005737]; go_process: DNA dependent DNA replication [goid 0006261]" /codon_start=1 /transl_table=11 /product="helicase, ATP-dependent" /protein_id="AAC73259.1" /db_xref="GI:1786342" /db_xref="ASAP:510" /translation="MLQCGAKNVNPLERFVSSLPVAAVLPELLTALDCAPQVLLSAPT GAGKSTWLPLQLLAHPGINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQ NCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQG LRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVA TAEMLRQESGSLLLFLPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPA PQGMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQ RAGRAGRLEPGISLHLIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSW LDQPPVVNLLAAKRLLQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAAT AAKIAAILEEPPRMGNSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLA GAFADRIARRRGQDGRYQLANGMGAMLDANDALSRHEWLIAPLLLQGSASPDARILLA LLVDIDELVQRCPQLVQQSDTVEWDDAQGTLKAWRRLQIGQLTVKVQPLAKPSEDELH QAMLNGIRDKGLSVLNWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLAALETWLLP HMTGVHSLRGLKSLDIYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPP ALAVRMQEMFGEATNPTIAQGRVPLVLELLSPAQRPLQITRDLSDFWKGAYREVQKEM KGRYPKHVWPDDPANTAPTRRTKKYS" gene 164730..167264 /gene="mrcB" /locus_tag="b0149" /note="synonyms: pbpF, ponB" CDS 164730..167264 /gene="mrcB" /locus_tag="b0149" /function="enzyme; Murein sacculus, peptidoglycan" /note="bifunctional penicilling-binding protein 1b: glycosyl transferase (N-terminal); transpeptidase (C-terminal); go_component: inner membrane [goid 0019866]; go_process: amino sugar biosynthesis [goid 0046349]; go_process: peptidoglycan biosynthesis [goid 0009252]; go_process: response to drug [goid 0042493]" /codon_start=1 /transl_table=11 /product="peptidoglycan synthetase; penicillin-binding protein 1B" /protein_id="AAC73260.1" /db_xref="GI:1786343" /db_xref="ASAP:516" /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD FPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLV DALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAM SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRILPVWTSDPQSLCQQSE MQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDMFGSN" gene 167484..169727 /gene="fhuA" /locus_tag="b0150" /note="synonyms: T1, T5rec, tonA" CDS 167484..169727 /gene="fhuA" /locus_tag="b0150" /function="membrane; Outer membrane constituents" /note="outer membrane pore protein, receptor for ferrichrome, colicin M, and phages T1, T5 and phi80; go_component: external outer membrane (sensu Gram-negative Bacteria) [goid 0009279]" /codon_start=1 /transl_table=11 /product="outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80" /protein_id="AAC73261.1" /db_xref="GI:1786344" /db_xref="ASAP:520" /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV TAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEA LSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLE RAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLD DDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGY YGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLR FAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDT QLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNAKDP ANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQ FTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRP IVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYT DAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANS FKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVV ATATFRF" gene 169778..170575 /gene="fhuC" /locus_tag="b0151" CDS 169778..170575 /gene="fhuC" /locus_tag="b0151" /function="transport; Transport of small molecules: Cations" /note="hydroxamate-dependent iron transport protein (ABC superfamily, atp_bind); go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="ATP-binding component of hydroxymate-dependent iron transport" /protein_id="AAC73262.1" /db_xref="GI:1786345" /db_xref="ASAP:522" /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG HNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM LVAQDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQERGLTVIAVLHDINMAARYCDYL VALRGGEMIAQGTPAEIMRGETLEMIYGIPMGILPHPAGAAPVSFVY" gene 170575..171465 /gene="fhuD" /locus_tag="b0152" CDS 170575..171465 /gene="fhuD" /locus_tag="b0152" /function="transport; Transport of small molecules: Cations" /note="hydroxamate-dependent iron transport protein (ABC superfamily, peri_bind); go_component: periplasmic space [goid 0042597]; go_process: iron ion transport [goid 0006826]" /codon_start=1 /transl_table=11 /product="hydroxamate-dependent iron uptake, cytoplasmic membrane component" /protein_id="AAC73263.1" /db_xref="GI:1786346" /db_xref="ASAP:524" /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW SAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYG ATLSAMHFVRVLDNAIGGKA" gene 171462..173444 /gene="fhuB" /locus_tag="b0153" CDS 171462..173444 /gene="fhuB" /locus_tag="b0153" /function="transport; Transport of small molecules: Cations" /note="hydroxamate-dependent iron transport protein (ABC superfamily, membrane); go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="hydroxamate-dependent iron uptake, cytoplasmic membrane component" /protein_id="AAC73264.1" /db_xref="GI:1786347" /db_xref="ASAP:526" /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP DIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG ITVTTLWAIPGAMASQFAAQAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM KVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWTWASGALLEDLMPWRWP RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL LPAGSLGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV LTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGMALTPTR IALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR" gene complement(173602..174882) /gene="hemL" /locus_tag="b0154" /note="synonyms: gsa, popC" CDS complement(173602..174882) /gene="hemL" /locus_tag="b0154" /EC_number="5.4.3.8" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /note="glutamate-1-semialdehyde aminotransferase (aminomutase), PLP-dependent" /codon_start=1 /transl_table=11 /product="glutamate-1-semialdehyde aminotransferase (aminomutase)" /protein_id="AAC73265.1" /db_xref="GI:1786349" /db_xref="ASAP:529" /translation="MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYL YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL GQPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPE FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAF GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEG LLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL" gene 175107..176528 /gene="yadQ" /locus_tag="b0155" /note="synonym: clcA" CDS 175107..176528 /gene="yadQ" /locus_tag="b0155" /function="putative transport; Not classified" /note="putative chlorine transport protein (ClC family)" /codon_start=1 /transl_table=11 /product="putative channel transporter" /protein_id="AAC73266.1" /db_xref="GI:1786350" /db_xref="ASAP:533" /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT LVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIA GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILA RTLAKQEAEQLARSKAASASENT" gene 176610..176954 /gene="yadR" /locus_tag="b0156" CDS 176610..176954 /gene="yadR" /locus_tag="b0156" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73267.1" /db_xref="GI:1786351" /db_xref="ASAP:538" /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA KSTCGCGSSFSI" gene complement(177001..177624) /gene="yadS" /locus_tag="b0157" CDS complement(177001..177624) /gene="yadS" /locus_tag="b0157" /function="orf; Unknown" /note="putative membrane protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73268.1" /db_xref="GI:1786352" /db_xref="ASAP:540" /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR" gene complement(177662..178462) /gene="yadT" /locus_tag="b0158" /note="synonym: btuF" CDS complement(177662..178462) /gene="yadT" /locus_tag="b0158" /function="orf; Unknown" /note="cyano-cobalamin transport protein (ABC superfamily, peri_bind); go_component: periplasmic space [goid 0042597]" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73269.1" /db_xref="GI:1786353" /db_xref="ASAP:542" /translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGI KVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFL QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP DQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD" gene complement(178455..179153) /gene="pfs" /locus_tag="b0159" /note="synonym: mtn" CDS complement(178455..179153) /gene="pfs" /locus_tag="b0159" /EC_number="3.2.2.9" /EC_number="3.2.2.16" /function="orf; Unknown" /note="5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73270.1" /db_xref="GI:1786354" /db_xref="ASAP:545" /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV TAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS SLMVESLVQKLAHG" gene 179237..180754 /gene="dgt" /locus_tag="b0160" /note="synonym: optA" CDS 179237..180754 /gene="dgt" /locus_tag="b0160" /EC_number="3.1.5.1" /function="enzyme; Central intermediary metabolism: Nucleotide hydrolysis" /note="go_component: cytoplasm [goid 0005737]; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="deoxyguanosine triphosphate triphosphohydrolase" /protein_id="AAC73271.1" /db_xref="GI:1786355" /db_xref="ASAP:548" /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDEL TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAAL RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS HPDVERLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR HRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ" gene 180884..182308 /gene="degP" /locus_tag="b0161" /note="synonym: htrA" CDS 180884..182308 /gene="degP" /locus_tag="b0161" /EC_number="3.4.21.-" /function="enzyme; Degradation of proteins, peptides, glyco" /note="periplasmic serine protease Do, heat shock protein; go_component: periplasmic space [goid 0042597]; go_process: response to temperature [goid 0009266]" /codon_start=1 /transl_table=11 /product="periplasmic serine protease Do; heat shock protein HtrA" /protein_id="AAC73272.1" /db_xref="GI:1786356" /db_xref="ASAP:551" /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV LDSKPSVLALNIQRGDSTIYLLMQ" gene 182445..183620 /gene="cdaR" /locus_tag="b0162" /note="synonyms: sdaR, yaeG" CDS 182445..183620 /gene="cdaR" /locus_tag="b0162" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; transcriptional activator of D-galactarate, D-glucarate and D-glycerate metabolism (sugar diacid regulator)" /codon_start=1 /transl_table=11 /product="regulator of D-galactarate, D-glucarate and D-glycerate metabolism" /protein_id="AAC73273.1" /db_xref="GI:1786357" /db_xref="ASAP:554" /translation="MHNGGLMAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGS GDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTG EPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQ RLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVL KPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTT MVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLA AWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER" gene complement(183709..184095) /gene="yaeH" /locus_tag="b0163" CDS complement(183709..184095) /gene="yaeH" /locus_tag="b0163" /function="putative structure; Not classified" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="putative structural protein" /protein_id="AAC73274.1" /db_xref="GI:1786359" /db_xref="ASAP:556" /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD DLRHLESVVTNKISEIEADLEKLTRK" gene complement(184257..185000) /gene="yaeI" /locus_tag="b0164" CDS complement(184257..185000) /gene="yaeI" /locus_tag="b0164" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73275.1" /db_xref="GI:1786360" /db_xref="ASAP:559" /translation="MHYCEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSL ISDAIALGIEQKPDLILLGGDYVLFDMSLNFSAFSDVLSPLAECAPTFACFGNHDRPV GTEKNHLIGETLKSAGITVLFNQATVIATPNRQFELVGTGDLWAGQCKPPPASEANLP RLVLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGE RHIYTTRGVGSLYGLRLNCRPEVTMLELV" gene complement(184987..185118) /locus_tag="b0165" CDS complement(184987..185118) /locus_tag="b0165" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73276.1" /db_xref="GI:1786361" /db_xref="ASAP:561" /translation="MHTGSTTLPDFFAGMSDDFTPPIFAGYCRDDSHELRFRLYALL" gene complement(185123..185947) /gene="dapD" /locus_tag="b0166" CDS complement(185123..185947) /gene="dapD" /locus_tag="b0166" /EC_number="2.3.1.117" /function="enzyme; Amino acid biosynthesis: Lysine" /note="go_component: cytoplasm [goid 0005737]; go_process: lysine biosynthesis via diaminopimelate [goid 0009089]" /codon_start=1 /transl_table=11 /product="2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase" /protein_id="AAC73277.1" /db_xref="GI:1786362" /db_xref="ASAP:565" /translation="MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALR VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE TGEIHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID" gene complement(185978..188650) /gene="glnD" /locus_tag="b0167" CDS complement(185978..188650) /gene="glnD" /locus_tag="b0167" /EC_number="2.7.7.59" /function="enzyme; Amino acid biosynthesis: Glutamine" /note="uridylyltransferase; go_component: cytoplasm [goid 0005737]; go_process: nitrogen metabolism [goid 0006807]; go_process: glutamine biosynthesis [goid 0006542]; go_process: protein modification [goid 0006464]" /codon_start=1 /transl_table=11 /product="protein PII; uridylyltransferase acts on regulator of glnA" /protein_id="AAC73278.1" /db_xref="GI:1786363" /db_xref="ASAP:568" /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP LSDVDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVHNSAITGI YSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI FTTRDGMAMDTFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED LFIIATADRRALNNELQQEVHQRLTEALNPNDKG" gene complement(188712..189506) /gene="map" /locus_tag="b0168" CDS complement(188712..189506) /gene="map" /locus_tag="b0168" /EC_number="3.4.11.18" /function="enzyme; Proteins - translation and modification" /note="go_process: protein folding [goid 0006457]" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="AAC73279.1" /db_xref="GI:1786364" /db_xref="ASAP:571" /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE" gene 189712..189847 /gene="t44" /locus_tag="b4414" misc_RNA 189712..189847 /gene="t44" /locus_tag="b4414" /product="unknown RNA" /note="identified in a large scale screen; function unknown" /db_xref="ASAP:47239" gene 189874..190599 /gene="rpsB" /locus_tag="b0169" CDS 189874..190599 /gene="rpsB" /locus_tag="b0169" /function="structural component; Ribosomal proteins - synthesis, modification" /note="go_component: cytosolic ribosome (sensu Bacteria) [goid 0009281]; go_component: cytoplasm [goid 0005737]; go_function: structural constituent of ribosome [goid 0003735]; go_process: protein biosynthesis [goid 0006412]" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S2" /protein_id="AAC73280.1" /db_xref="GI:1786365" /db_xref="ASAP:575" /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT NWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA ATVREGRSQDLASQAEESFVEAE" gene 190857..191708 /gene="tsf" /locus_tag="b0170" CDS 190857..191708 /gene="tsf" /locus_tag="b0170" /function="factor; Proteins - translation and modification" /note="go_component: cytoplasm [goid 0005737]; go_process: protein biosynthesis [goid 0006412]" /codon_start=1 /transl_table=11 /product="protein chain elongation factor EF-Ts" /protein_id="AAC73281.1" /db_xref="GI:1786366" /db_xref="ASAP:579" /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV AAMSKQS" gene 191855..192580 /gene="pyrH" /locus_tag="b0171" /note="synonym: smbA" CDS 191855..192580 /gene="pyrH" /locus_tag="b0171" /EC_number="2.7.4.-" /function="enzyme; Central intermediary metabolism: Nucleotide interconversions" /note="go_component: cytoplasm [goid 0005737]; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="uridylate kinase" /protein_id="AAC73282.1" /db_xref="GI:1786367" /db_xref="ASAP:582" /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF NMNKPGALRRVVMGEKEGTLITE" gene 192872..193429 /gene="frr" /locus_tag="b0172" CDS 192872..193429 /gene="frr" /locus_tag="b0172" /function="factor; Proteins - translation and modification" /note="go_component: cytoplasm [goid 0005737]; go_process: protein biosynthesis [goid 0006412]; go_process: translational attenuation [goid 0009386]" /codon_start=1 /transl_table=11 /product="ribosome releasing factor" /protein_id="AAC73283.1" /db_xref="GI:1786368" /db_xref="ASAP:588" /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV QKLTDAAIKKIEAALADKEAELMQF" gene 193521..194717 /gene="ispC" /locus_tag="b0173" /note="synonyms: dxr, yaeM" CDS 193521..194717 /gene="ispC" /locus_tag="b0173" /EC_number="1.1.1.-" /function="putative transport; Not classified" /note="1-deoxy-D-xylulose 5-phosphate reductoisomerase" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 4-phosphate synthase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase" /protein_id="AAC73284.1" /db_xref="GI:1786369" /db_xref="ASAP:592" /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIV GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE VMRLAS" gene 194903..195664 /gene="uppS" /locus_tag="b0174" /note="synonym: yaeS" CDS 194903..195664 /gene="uppS" /locus_tag="b0174" /EC_number="2.5.1.31" /function="orf; Unknown" /note="go_component: cytoplasm [goid 0005737]; go_function: cell surface antigen activity, host-interacting [goid 0042280]" /codon_start=1 /transl_table=11 /product="undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase)" /protein_id="AAC73285.1" /db_xref="GI:1786371" /db_xref="ASAP:595" /translation="MMLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHK AGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHR HNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAE KVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTD VLWPDFDEQDFEGALNAFANRERRFGGTEPGDETA" gene 195785..196534 /gene="cdsA" /locus_tag="b0175" CDS 195785..196534 /gene="cdsA" /locus_tag="b0175" /EC_number="2.7.7.41" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="EcoGene suggests alternate start codon; CDP-diglyceride synthase; go_component: inner membrane [goid 0019866]; go_process: phospholipid biosynthesis [goid 0008654]" /codon_start=1 /transl_table=11 /product="CDP-diglyceride synthetase" /protein_id="AAC73286.1" /db_xref="GI:1786372" /db_xref="ASAP:600" /translation="MLAAWEWGQLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNI HQPLVEISLWASLGWWIVALLLVLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLAL RAWHYDENHYSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGG LATAAVISWGYGMWANLDVAPVTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLI PGHGGILDRIDSLTAAVPVFACLLLLVFRTL" gene 196546..197898 /gene="yaeL" /locus_tag="b0176" /note="synonym: ecfE" CDS 196546..197898 /gene="yaeL" /locus_tag="b0176" /function="orf; Unknown" /note="membrane-associated protease" /codon_start=1 /transl_table=11 /product="putative protease" /protein_id="AAC73287.1" /db_xref="GI:1786373" /db_xref="ASAP:603" /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP DWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR GPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI ERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI INLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL " gene 197928..200360 /gene="yaeT" /locus_tag="b0177" CDS 197928..200360 /gene="yaeT" /locus_tag="b0177" /function="orf; Unknown" /note="go_component: external outer membrane (sensu Gram-negative Bacteria) [goid 0009279]" /codon_start=1 /transl_table=11 /product="putative outer membrane antigen" /protein_id="AAC73288.1" /db_xref="GI:1786374" /db_xref="ASAP:605" /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK AEQFQFNIGKTW" gene 200482..200967 /gene="hlpA" /locus_tag="b0178" /note="synonyms: firA, ompH, skp" CDS 200482..200967 /gene="hlpA" /locus_tag="b0178" /function="factor; Basic proteins - synthesis, modification" /note="go_component: periplasmic space [goid 0042597]; go_process: protein folding [goid 0006457]" /codon_start=1 /transl_table=11 /product="periplasmic molecular chaperone for outer membrane proteins" /protein_id="AAC73289.1" /db_xref="GI:1786375" /db_xref="ASAP:608" /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV K" gene 200971..201996 /gene="lpxD" /locus_tag="b0179" /note="synonyms: fir, firA, hlpA, omsA, skp, ssc" CDS 200971..201996 /gene="lpxD" /locus_tag="b0179" /EC_number="2.3.1.-" /function="enzyme; Surface polysaccharides & antigens" /note="go_function: cell surface antigen activity, host-interacting [goid 0042280]; go_process: lipid A biosynthesis [goid 0009245]" /codon_start=1 /transl_table=11 /product="UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase" /protein_id="AAC73290.1" /db_xref="GI:1786376" /db_xref="ASAP:610" /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG ALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE RKVNQQD" gene 202101..202556 /gene="fabZ" /locus_tag="b0180" /note="synonym: sefA" CDS 202101..202556 /gene="fabZ" /locus_tag="b0180" /EC_number="4.2.1.-" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="(3R)-hydroxymyristol acyl carrier protein dehydratase" /protein_id="AAC73291.1" /db_xref="GI:1786377" /db_xref="ASAP:613" /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA" gene 202560..203348 /gene="lpxA" /locus_tag="b0181" CDS 202560..203348 /gene="lpxA" /locus_tag="b0181" /EC_number="2.3.1.129" /function="enzyme; Surface polysaccharides & antigens" /note="UDP-N-acetylglucosamine acetyltransferase; go_component: cytoplasm [goid 0005737]; go_function: cell surface antigen activity, host-interacting [goid 0042280]; go_process: lipid A biosynthesis [goid 0009245]" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis" /protein_id="AAC73292.1" /db_xref="GI:1786378" /db_xref="ASAP:618" /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVL KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR" gene 203348..204496 /gene="lpxB" /locus_tag="b0182" /note="synonym: pgsB" CDS 203348..204496 /gene="lpxB" /locus_tag="b0182" /EC_number="2.4.1.182" /function="enzyme; Macromolecule metabolism: Lipopolysaccharide" /note="tetraacyldisaccharide-1-P; go_component: cytoplasm [goid 0005737]; go_function: cell surface antigen activity, host-interacting [goid 0042280]; go_process: lipid A biosynthesis [goid 0009245]" /codon_start=1 /transl_table=11 /product="tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step" /protein_id="AAC73293.1" /db_xref="GI:1786379" /db_xref="ASAP:620" /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKEHVPNARFVGVAGP RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL LRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDLSVHLLDGMGREAMVASDAALLASG TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP QKLAAALLPLLANGKTSHAMHDTFRELHQQIRCNADEQAAQAVLELAQ" gene 204493..205089 /gene="rnhB" /locus_tag="b0183" CDS 204493..205089 /gene="rnhB" /locus_tag="b0183" /EC_number="3.1.26.4" /function="enzyme; Degradation of RNA" /note="RNAse HII; go_component: cytoplasm [goid 0005737]; go_process: RNA catabolism [goid 0006401]; go_process: RNA catabolism [goid 0006401]" /codon_start=1 /transl_table=11 /product="RNAse HII, degrades RNA of DNA-RNA hybrids" /protein_id="AAC73294.1" /db_xref="GI:1786380" /db_xref="ASAP:622" /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN DSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS" gene 205126..208608 /gene="dnaE" /locus_tag="b0184" /note="synonyms: polC, sdgC" CDS 205126..208608 /gene="dnaE" /locus_tag="b0184" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /note="go_component: cytoplasm [goid 0005737]; go_process: DNA dependent DNA replication [goid 0006261]" /codon_start=1 /transl_table=11 /product="DNA polymerase III, alpha subunit" /protein_id="AAC73295.1" /db_xref="GI:1786381" /db_xref="ASAP:624" /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLIS KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERLKRRPEYDERLETELQVINQ MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAEL AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISL TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL RGLIGSEQVELEFD" gene 208621..209580 /gene="accA" /locus_tag="b0185" CDS 208621..209580 /gene="accA" /locus_tag="b0185" /EC_number="6.4.1.2" /function="enzyme; Fatty acid and phosphatidic acid biosynthesis" /note="acetylCoA carboxylase, carboxytransferase subunit alpha; go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="acetylCoA carboxylase, carboxytransferase component, alpha subunit" /protein_id="AAC73296.1" /db_xref="GI:1786382" /db_xref="ASAP:630" /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA" gene 209679..211820 /gene="ldcC" /locus_tag="b0186" CDS 209679..211820 /gene="ldcC" /locus_tag="b0186" /EC_number="4.1.1.18" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="go_process: glycolysis [goid 0006096]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="lysine decarboxylase 2, constitutive" /protein_id="AAC73297.1" /db_xref="GI:1786384" /db_xref="ASAP:633" /translation="MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLK FIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWF FEYALGQAEDIAIRMRQYTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQK SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTN GTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIP RREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWV PYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEA FMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWF FDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEG IPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRI KNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDTLPEMIMTPHQAW QRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSV GQHYPGFETDIHGAKQDEDGVYRVRVLKMAG" gene 211850..212266 /gene="yaeR" /locus_tag="b0187" CDS 211850..212266 /gene="yaeR" /locus_tag="b0187" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; putative enzyme" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73298.1" /db_xref="GI:1786385" /db_xref="ASAP:635" /translation="MLLTNKGDVMLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSE VYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHL ESHNVKCETIRVDPYTQKRFTFFNDPDGLPLELYEQ" gene 212331..213629 /gene="tilS" /locus_tag="b0188" /note="synonyms: mesJ, yaeN" CDS 212331..213629 /gene="tilS" /locus_tag="b0188" /function="responsible for lysidine formation in tRNA-Ile anticodon (C34 to L34)" /codon_start=1 /transl_table=11 /product="tRNA(Ile)-lysidine synthetase" /protein_id="AAC73299.1" /db_xref="GI:1786386" /db_xref="ASAP:638" /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVAL RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR GELVQWARQYDLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAE QESLLDELLADDLAHCQSPQGTLQIVPMLAMSDARRAAIIRRWLAGQNAPMPSRDALV RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSENIVPWQTWLQPLELPA GLGSVQLNAGGDIRPPRADEAVSVRFKAPGLLHIVGRNGGRKLKKIWQELGVPPWLRD TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS" gene complement(213678..213938) /gene="rof" /locus_tag="b0189" /note="synonym: yaeO" CDS complement(213678..213938) /gene="rof" /locus_tag="b0189" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; modulator of Rho-dependent transcription termination; go_component: cytoplasm [goid 0005737]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="modulator of Rho-dependent transcription termination." /protein_id="AAC73300.1" /db_xref="GI:1786387" /db_xref="ASAP:641" /translation="MSMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASD LVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES" gene complement(213925..214125) /gene="yaeP" /locus_tag="b4406" CDS complement(213925..214125) /gene="yaeP" /locus_tag="b4406" /codon_start=1 /transl_table=11 /product="conserved hypothetical protein" /protein_id="AAT48124.1" /db_xref="GI:48994876" /db_xref="ASAP:47214" /db_xref="Swiss-Prot:P52099" /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS EAVREKAAYAAANLLVSDYVNE" gene 214291..214836 /gene="yaeQ" /locus_tag="b0190" CDS 214291..214836 /gene="yaeQ" /locus_tag="b0190" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73301.1" /db_xref="GI:1786388" /db_xref="ASAP:648" /translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEV ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV IWLSDDKNNLEVNLTAWQQPS" gene 214833..215255 /gene="yaeJ" /locus_tag="b0191" CDS 214833..215255 /gene="yaeJ" /locus_tag="b0191" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73302.1" /db_xref="GI:1786389" /db_xref="ASAP:650" /translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAMIKELTTEK KARRPTRPTRASKERRLASKAQKSSVKAMRGKVRSGRE" gene 215269..215979 /gene="cutF" /locus_tag="b0192" /note="synonym: nlpE" CDS 215269..215979 /gene="cutF" /locus_tag="b0192" /function="putative transport; Detoxification" /note="copper homeostasis protein; go_component: external outer membrane (sensu Gram-negative Bacteria) [goid 0009279]; go_process: xenobiotic metabolism [goid 0006805]" /codon_start=1 /transl_table=11 /product="copper homeostasis protein (lipoprotein)" /protein_id="AAC73303.1" /db_xref="GI:1786390" /db_xref="ASAP:652" /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAA TFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLA PDTAGKFYPNQDCSSLGQ" gene complement(216179..217057) /gene="yaeF" /locus_tag="b0193" CDS complement(216179..217057) /gene="yaeF" /locus_tag="b0193" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; putative synthase" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73304.1" /db_xref="GI:1786391" /db_xref="ASAP:655" /translation="MPERVLNFRALFLHGLYKMDKPKAYCRLFLPSFLLLSACTVDIS QPDPSATAVDAEAKTWAVKFQHQSSFTEQSIKEITAPDLKPGDLLFSSSLGVTSFGIR VFSTSSVSHVAIFLGDNNVAEATGAGVQIVSLKKAMKHSDKLFVLRVPDLTPQQATDI TAFANKIKDSGYNYRGIVEFIPFMVTRQMCSLNPFSEDFRQQCVSGLAKAQLSSVGEG DKKSWFCSEFVTDAFAKAGHPLTLAQSGWISPADLMHMRIGDVSAFKPETQLQYVGHL KPGIYIKAGRFVGLTR" gene complement(217057..218775) /gene="proS" /locus_tag="b0194" /note="synonym: drp" CDS complement(217057..218775) /gene="proS" /locus_tag="b0194" /EC_number="6.1.1.15" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="go_component: cytoplasm [goid 0005737]; go_process: amino acid activation [goid 0006418]" /codon_start=1 /transl_table=11 /product="proline tRNA synthetase" /protein_id="AAC73305.1" /db_xref="GI:1786392" /db_xref="ASAP:657" /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK TVKTLLVKAVEGSSFPQVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA GDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL VKQIKG" gene complement(218887..219594) /gene="yaeB" /locus_tag="b0195" CDS complement(218887..219594) /gene="yaeB" /locus_tag="b0195" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73306.1" /db_xref="GI:1786393" /db_xref="ASAP:661" /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNV RWRVTDAGFEVFALEPR" gene complement(219591..219995) /gene="rcsF" /locus_tag="b0196" CDS complement(219591..219995) /gene="rcsF" /locus_tag="b0196" /function="regulator; Surface polysaccharides & antigens" /note="regulator in colanic acid synthesis; overexpression confers mucoid phenotype, increases capsule synthesis; go_component: capsule (sensu Bacteria) [goid 0030113]; go_function: cell surface antigen activity, host-interacting [goid 0042280]; go_process: colanic acid biosynthesis [goid 0009242]" /codon_start=1 /transl_table=11 /product="regulator in colanic acid synthesis; interacts with RcsB" /protein_id="AAC73307.1" /db_xref="GI:1786394" /db_xref="ASAP:663" /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK" gene complement(220113..220928) /gene="metQ" /locus_tag="b0197" /note="synonyms: yaeC, metD" CDS complement(220113..220928) /gene="metQ" /locus_tag="b0197" /function="Transport of small molecules: Amino acids, amines" /note="go_component: periplasmic space [goid 0042597]" /codon_start=1 /transl_table=11 /product="D-methionine transport protein (ABC superfamily, peri_bind)" /protein_id="AAC73308.1" /db_xref="GI:1786396" /db_xref="ASAP:666" /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI FVEDKESPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW" gene complement(220968..221621) /gene="metI" /locus_tag="b0198" /note="synonyms: yaeE, metD" CDS complement(220968..221621) /gene="metI" /locus_tag="b0198" /function="Transport of small molecules: Amino acids, amines" /note="go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="D- and L-methionine transport protein (ABC superfamily, membrane)" /protein_id="AAC73309.1" /db_xref="GI:1786397" /db_xref="ASAP:668" /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK" gene complement(221614..222645) /gene="metN" /locus_tag="b0199" /note="synonyms: abc, metD" CDS complement(221614..222645) /gene="metN" /locus_tag="b0199" /function="Transport of small molecules: Amino acids, amines" /note="go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="D- and L-methionine transport protein (ABC superfamily, atp_bind)" /protein_id="AAC73310.1" /db_xref="GI:1786398" /db_xref="ASAP:671" /translation="MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGK STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN VALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH VKVEVLGYV" gene 222833..223408 /gene="gmhB" /locus_tag="b0200" /note="synonym: yaeD" CDS 222833..223408 /gene="gmhB" /locus_tag="b0200" /function="enzyme; Surface polysaccharides and antigens" /codon_start=1 /transl_table=11 /product="D,D-heptose 1,7-bisphosphate phosphatase" /protein_id="AAC73311.1" /db_xref="GI:1786399" /db_xref="ASAP:675" /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK MGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKP ITPEAENAADWVLNSLADLPQAIKKQQKPAQ" gene 223771..225312 /gene="rrsH" /locus_tag="b0201" rRNA 223771..225312 /gene="rrsH" /locus_tag="b0201" /product="16S ribosomal RNA" /note="16S rRNA of rrnH operon; go_component: cytosolic ribosome (sensu Bacteria) [goid 0009281]; go_component: cytoplasm [goid 0005737]; go_process: rRNA metabolism [goid 0016072]; go_process: protein biosynthesis [goid 0006412]" /function="RNA; Ribosomal and stable RNAs" /db_xref="ASAP:677" gene 225381..225457 /gene="ileV" /locus_tag="b0202" tRNA 225381..225457 /gene="ileV" /locus_tag="b0202" /product="tRNA-Ile" /note="codons recognized: AUY; anticodon: GAU isoleucine tRNA 1; go_component: cytoplasm [goid 0005737]; go_process: tRNA metabolism [goid 0006399]" /anticodon=(pos:225415..225417,aa:Ile) /function="RNA; tRNA" /db_xref="ASAP:679" gene 225500..225575 /gene="alaV" /locus_tag="b0203" tRNA 225500..225575 /gene="alaV" /locus_tag="b0203" /product="tRNA-Ala" /note="codons recognized: GCD; anticodon: UGC alanine tRNA 1B; go_component: cytoplasm [goid 0005737]; go_process: tRNA metabolism [goid 0006399]" /anticodon=(pos:225533..225535,aa:Ala) /function="RNA; tRNA" /db_xref="ASAP:682" gene 225759..228662 /gene="rrlH" /locus_tag="b0204" rRNA 225759..228662 /gene="rrlH" /locus_tag="b0204" /product="23S ribosomal RNA" /note="23S rRNA of rrnH operon; go_component: cytosolic ribosome (sensu Bacteria) [goid 0009281]; go_component: cytoplasm [goid 0005737]; go_process: rRNA metabolism [goid 0016072]; go_process: protein biosynthesis [goid 0006412]" /function="RNA; Ribosomal and stable RNAs" /db_xref="ASAP:684" gene 228756..228875 /gene="rrfH" /locus_tag="b0205" rRNA 228756..228875 /gene="rrfH" /locus_tag="b0205" /product="5S ribosomal RNA" /note="5S rRNA of rrnH operon; go_component: cytosolic ribosome (sensu Bacteria) [goid 0009281]; go_component: cytoplasm [goid 0005737]; go_process: rRNA metabolism [goid 0016072]; go_process: protein biosynthesis [goid 0006412]" /function="RNA; Ribosomal and stable RNAs" /db_xref="ASAP:686" gene 228928..229004 /gene="aspU" /locus_tag="b0206" tRNA 228928..229004 /gene="aspU" /locus_tag="b0206" /product="tRNA-Asp" /note="codons recognized: GAY; anticodon: GUC aspartate tRNA 1; go_component: cytoplasm [goid 0005737]; go_process: tRNA metabolism [goid 0006399]" /anticodon=(pos:228962..228964,aa:Asp) /function="RNA; tRNA" /db_xref="ASAP:688" gene 229167..229970 /gene="dkgB" /locus_tag="b0207" /note="synonym: yafB" CDS 229167..229970 /gene="dkgB" /locus_tag="b0207" /EC_number="1.1.1.-" /function="putative enzyme; Not classified" /note="go_component: cytoplasm [goid 0005737]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="2,5-diketo-D-gluconate reductase B" /protein_id="AAC73312.1" /db_xref="GI:1786400" /db_xref="ASAP:692" /translation="MAIPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAA VGQAIAESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPN DEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQ NRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSV IPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD" gene complement(229967..230881) /gene="yafC" /locus_tag="b0208" CDS complement(229967..230881) /gene="yafC" /locus_tag="b0208" /function="putative transport; Not classified" /note="putative transcriptional regulator (LysR family); go_function: transcriptional activator activity [goid 0016563]; go_function: transcriptional repressor activity [goid 0016564]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator LYSR-type" /protein_id="AAC73313.1" /db_xref="GI:1786401" /db_xref="ASAP:694" /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLF NSYRKIIASPDYISRYGKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGL SSNSGETLKQLCLSGNGIACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDR AVSTRIRAFIDFLSEHVKTAPGGAVREA" gene 231122..231922 /gene="yafD" /locus_tag="b0209" CDS 231122..231922 /gene="yafD" /locus_tag="b0209" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73314.1" /db_xref="GI:1786403" /db_xref="ASAP:700" /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERI RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK" gene 231926..232549 /gene="yafE" /locus_tag="b0210" CDS 231926..232549 /gene="yafE" /locus_tag="b0210" /function="putative enzyme; Not classified" /note="putative methyltransferase; go_process: biotin biosynthesis [goid 0009102]" /codon_start=1 /transl_table=11 /product="putative biotin synthesis protein" /protein_id="AAC73315.1" /db_xref="GI:1786404" /db_xref="ASAP:702" /translation="MSGLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKN ITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP GHPVRDIWLQTVEALRDTSHVRNYASGEWLTLINEANLIVDNLITDKLPLEFSSWVAR MRTPEALVDAIRIYQQSASTEVRTYFALQNDGFFTSDIIMVDAHKAA" gene complement(232597..233955) /gene="mltD" /locus_tag="b0211" /note="synonym: dniR" CDS complement(232597..233955) /gene="mltD" /locus_tag="b0211" /EC_number="3.2.1.-" /function="regulator; Energy metabolism, carbon: Anaerobic respiration" /note="lytic murein transglycosylase C, membrane-bound; go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_process: anaerobic respiration [goid 0009061]; go_process: cytochrome biogenesis [goid 0017004]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="membrane-bound lytic murein transglycosylase D" /protein_id="AAC73316.1" /db_xref="GI:1786405" /db_xref="ASAP:704" /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVAD NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP DS" gene complement(234027..234782) /gene="gloB" /locus_tag="b0212" CDS complement(234027..234782) /gene="gloB" /locus_tag="b0212" /EC_number="3.1.2.6" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="putative hydroxyacylglutathione hydrolase; go_process: methylglyoxal metabolism [goid 0009438]" /codon_start=1 /transl_table=11 /product="probable hydroxyacylglutathione hydrolase" /protein_id="AAC73317.1" /db_xref="GI:1786406" /db_xref="ASAP:707" /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNW QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTL VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR TEDIDLINVINEETLLQQPEERFAWLRSKKDRF" gene 234798..235538 /gene="yafS" /locus_tag="b0213" CDS 234798..235538 /gene="yafS" /locus_tag="b0213" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; putative methyltransferase" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73318.1" /db_xref="GI:1786407" /db_xref="ASAP:713" /translation="MKRKVVMKPARVPQTVVAPDCWGDLPWGKLYRKALERQLNPWFT KMYGFHLLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLL AHTLPWCTDPHRLLREADRVLIDDGWLVISGFNPISFMGLRKLVPVLRKTSPYNSRMF TLMRQLDWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLT LNPMKQSKNKPRIRQAVGATRQCRKPQA" gene complement(235535..236002) /gene="rnhA" /locus_tag="b0214" /note="synonyms: cer, dasF, herA, rnh, sdrA, sin" CDS complement(235535..236002) /gene="rnhA" /locus_tag="b0214" /EC_number="3.1.26.4" /function="enzyme; Degradation of RNA" /note="RNase HI, degrades RNA of DNA-RNA hybrids; go_component: cytoplasm [goid 0005737]; go_process: RNA catabolism [goid 0006401]; go_process: DNA dependent DNA replication [goid 0006261]; go_process: proteolysis and peptidolysis [goid 0006508]" /codon_start=1 /transl_table=11 /product="RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication" /protein_id="AAC73319.1" /db_xref="GI:1786408" /db_xref="ASAP:717" /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV" gene 236067..236798 /gene="dnaQ" /locus_tag="b0215" /note="synonym: mutD" CDS 236067..236798 /gene="dnaQ" /locus_tag="b0215" /EC_number="2.7.7.7" /function="enzyme; DNA - replication, repair, restriction/modification" /note="DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function (N-terminal); alpha subunit binding domain (C-terminal); go_component: cytoplasm [goid 0005737]; go_process: DNA dependent DNA replication [goid 0006261]; go_process: protein folding [goid 0006457]" /codon_start=1 /transl_table=11 /product="DNA polymerase III, epsilon subunit" /protein_id="AAC73320.1" /db_xref="GI:1786409" /db_xref="ASAP:722" /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT DEEIAAHEARLDLVQKKGGSCLWRA" gene 236931..237007 /gene="aspV" /locus_tag="b0216" tRNA 236931..237007 /gene="aspV" /locus_tag="b0216" /product="tRNA-Asp" /note="codons recognized: GAY; anticodon: GUC aspartate tRNA 1; go_component: cytoplasm [goid 0005737]; go_process: tRNA metabolism [goid 0006399]" /anticodon=(pos:236965..236967,aa:Asp) /function="RNA; tRNA" /db_xref="ASAP:724" gene 237335..238120 /gene="yafT" /locus_tag="b0217" CDS 237335..238120 /gene="yafT" /locus_tag="b0217" /function="putative enzyme; Not classified" /note="conserved protein" /codon_start=1 /transl_table=11 /product="putative aminopeptidase" /protein_id="AAC73321.1" /db_xref="GI:1786410" /db_xref="ASAP:727" /translation="MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTP QQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMR KYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIV YQDMLQTGKYDSALKSTVWSDYKNDKLTDAISLRYLVRFTLVDVATGEWATWSPVNYE YKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ" gene complement(238746..239084) /gene="yafU" /locus_tag="b0218" CDS complement(238746..239084) /gene="yafU" /locus_tag="b0218" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73322.1" /db_xref="GI:1786411" /db_xref="ASAP:729" /translation="MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGF PVILVGGAILLTGIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPF MYVLNTPPVI" gene complement(239419..240189) /gene="yafV" /locus_tag="b0219" CDS complement(239419..240189) /gene="yafV" /locus_tag="b0219" /function="putative enzyme; Not classified" /note="putative NAD(P)-binding amidase-type enzyme (C-N hydrolase family)" /codon_start=1 /transl_table=11 /product="putative EC 3.5. amidase-type enzyme" /protein_id="AAC73323.1" /db_xref="GI:1786412" /db_xref="ASAP:734" /translation="MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMF TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAL YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA TADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW" gene 240343..240816 /gene="ykfE" /locus_tag="b0220" /note="synonym: ivy" CDS 240343..240816 /gene="ykfE" /locus_tag="b0220" /function="orf; Unknown" /note="inhibitor of vertebrate C-type lysozyme, periplasmic" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73324.1" /db_xref="GI:1786413" /db_xref="ASAP:740" /translation="MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTK AAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEK SNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK" gene complement(240859..243339) /gene="fadE" /locus_tag="b0221" /note="synonyms: fadF, yafH" CDS complement(240859..243339) /gene="fadE" /locus_tag="b0221" /function="putative enzyme; Not classified" /note="EcoGene suggests alternate start codon; putative medium-/long-chain acyl-CoA dehydrogenase; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="medium-long-chain fatty acyl-CoA dehydrogenase" /protein_id="AAC73325.1" /db_xref="GI:1786414" /db_xref="ASAP:743" /translation="MVRPPTSKGLFVMMILSILATVVLLGALFYHRVSLFISSLILLA WTAALGVAGLWSAWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEA IDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHEL ADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNS LGPGELLQHYGTDEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQ GQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGV EIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPS NSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGI MLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITV EGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSF WLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLG DILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAG LLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEA LVDVIAADPIHQRICKELGKNLPFTRLDELAHNALVKGLIDKDEAAILVKAEESRLRS INVDDFDPEELATKPVKLPEKVRKVEAA" gene 243543..244121 /gene="lpcA" /locus_tag="b0222" /note="synonym: gmhA" CDS 243543..244121 /gene="lpcA" /locus_tag="b0222" /EC_number="5.-.-.-" /function="enzyme; Surface polysaccharides & antigens" /note="D-sedoheptulose 7-phosphate isomerase; go_component: cytoplasm [goid 0005737]; go_function: cell surface antigen activity, host-interacting [goid 0042280]; go_process: lipopolysaccharide core region biosynthesis [goid 0009244]" /codon_start=1 /transl_table=11 /product="phosphoheptose isomerase" /protein_id="AAC73326.1" /db_xref="GI:1786416" /db_xref="ASAP:751" /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK" gene 244327..245094 /gene="yafJ" /locus_tag="b0223" CDS 244327..245094 /gene="yafJ" /locus_tag="b0223" /function="putative enzyme; Not classified" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="putative amidotransferase" /protein_id="AAC73327.1" /db_xref="GI:1786417" /db_xref="ASAP:755" /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT PNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV" gene complement(245065..245805) /gene="yafK" /locus_tag="b0224" CDS complement(245065..245805) /gene="yafK" /locus_tag="b0224" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73328.1" /db_xref="GI:1786418" /db_xref="ASAP:757" /translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN GRYVVSKPLSHEVVQPQLASNYTLPEAK" gene complement(245961..246239) /gene="yafQ" /locus_tag="b0225" CDS complement(245961..246239) /gene="yafQ" /locus_tag="b0225" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73329.1" /db_xref="GI:1786419" /db_xref="ASAP:761" /translation="MIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLP AVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG" gene complement(246242..246502) /gene="dinJ" /locus_tag="b0226" CDS complement(246242..246502) /gene="dinJ" /locus_tag="b0226" /function="phenotype; Not classified" /note="go_process: DNA repair [goid 0006281]" /codon_start=1 /transl_table=11 /product="damage-inducible protein J" /protein_id="AAC73330.1" /db_xref="GI:1786420" /db_xref="ASAP:764" /translation="MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVARE KALPFDLREPNQLTIQSIKNSEAGIDVHKAKDADDLFDKLGI" gene 246712..247461 /gene="yafL" /locus_tag="b0227" CDS 246712..247461 /gene="yafL" /locus_tag="b0227" /function="putative membrane; Not classified" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="AAC73331.1" /db_xref="GI:1786421" /db_xref="ASAP:775" /translation="MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQN RARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQA LAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILE AKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRT GETIRISRLAEPFWQDHFLGARRILTEETIL" gene 247637..248134 /gene="yafM" /locus_tag="b0228" CDS 247637..248134 /gene="yafM" /locus_tag="b0228" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73332.1" /db_xref="GI:1786422" /db_xref="ASAP:779" /translation="MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKR DRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHA IRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDFSAG ERIIS" gene complement(248358..250097) /gene="fhiA" /locus_tag="b0229" CDS complement(248358..250097) /gene="fhiA" /locus_tag="b0229" /function="putative enzyme; Surface structures" /note="EcoGene suggests alternate start codon; putative transport protein, flagellar biosynthesis; go_component: flagellum [goid 0019861]; go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis" /protein_id="AAC73333.1" /db_xref="GI:1786423" /db_xref="ASAP:782" /translation="MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAI DADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVC IGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRN QLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKQPLAAEAEEKSL ETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVIS DGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVQ GNDPAYGMPVTWIQAAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQ LHNRLSSTAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSTVTKD HILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVP VDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEV PDELELKIMGALM" gene 250042..250827 /gene="mbhA" /locus_tag="b0230" CDS 250042..250827 /gene="mbhA" /locus_tag="b0230" /function="putative structure; Not classified" /note="EcoGene suggests alternate start codon; putative chemotaxis protein; go_process: taxis [goid 0042330]" /codon_start=1 /transl_table=11 /product="putative motility protein" /protein_id="AAC73334.1" /db_xref="GI:1786424" /db_xref="ASAP:785" /translation="MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSH PPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEME IVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMA YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRI EIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR" gene 250898..251953 /gene="dinB" /locus_tag="b0231" /note="synonym: dinP" CDS 250898..251953 /gene="dinB" /locus_tag="b0231" /note="DNA polymerase IV, devoid of proofreading, damage-inducible protein P; go_component: cytoplasm [goid 0005737]; go_process: DNA dependent DNA replication [goid 0006261]; go_process: SOS response [goid 0009432]" /codon_start=1 /transl_table=11 /product="DNA polymerase IV" /protein_id="AAC73335.1" /db_xref="GI:1786425" /db_xref="ASAP:789" /translation="MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTA NYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSL DEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNG QFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKF GRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAK VKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGL HVTLLDPQMERQLVLGL" gene 252005..252298 /gene="yafN" /locus_tag="b0232" CDS 252005..252298 /gene="yafN" /locus_tag="b0232" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73336.1" /db_xref="GI:1786426" /db_xref="ASAP:793" /translation="MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSAS AFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE" gene 252301..252699 /gene="yafO" /locus_tag="b0233" CDS 252301..252699 /gene="yafO" /locus_tag="b0233" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73337.1" /db_xref="GI:1786427" /db_xref="ASAP:795" /translation="MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALY DDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIA ILKPEPHKLARDNNQMHKIGKMAEAFRMRF" gene 252709..253161 /gene="yafP" /locus_tag="b0234" CDS 252709..253161 /gene="yafP" /locus_tag="b0234" /function="orf; Unknown" /note="putative acyltransferase" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73338.1" /db_xref="GI:1786428" /db_xref="ASAP:801" /translation="MNNIQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQISAWAQI DESRWKEKLAKSQVWVAIINAQPVGFISRIEHYIDMLFVDPEYTRRGVASALLKPLIK SESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFTNFYMRYKPQH" gene 253467..253733 /gene="ykfJ" /locus_tag="b0235" CDS 253467..253733 /gene="ykfJ" /locus_tag="b0235" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73339.1" /db_xref="GI:1786430" /db_xref="ASAP:805" /translation="MEWYMGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQ RVVGMPDLHPGRGYPIGAAFFSVGRFYPARRRGNGAGNRNGPLL" gene 253702..254202 /gene="prfH" /locus_tag="b0236" CDS 253702..254202 /gene="prfH" /locus_tag="b0236" /function="putative factor; Proteins - translation and modification" /note="putative peptide chain release factor; go_component: cytoplasm [goid 0005737]; go_process: protein biosynthesis [goid 0006412]" /codon_start=1 /transl_table=11 /product="probable peptide chain release factor" /protein_id="AAC73340.1" /db_xref="GI:1786431" /db_xref="ASAP:807" /translation="MLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPY RPHHGRKNWFLGIGRFTADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGI SVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTG MAFIEG" gene complement(254259..255716) /gene="pepD" /locus_tag="b0237" CDS complement(254259..255716) /gene="pepD" /locus_tag="b0237" /EC_number="3.4.13.3" /function="enzyme; Degradation of proteins, peptides, glyco" /note="aminopeptidase D (aminoacyl-histidine dipeptidase); go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="aminoacyl-histidine dipeptidase (peptidase D)" /protein_id="AAC73341.1" /db_xref="GI:1786432" /db_xref="ASAP:809" /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQGNWL QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVL KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK" gene 255977..256435 /gene="gpt" /locus_tag="b0238" /note="synonyms: glyD, gpp, gxu" CDS 255977..256435 /gene="gpt" /locus_tag="b0238" /EC_number="2.4.2.22" /function="enzyme; Salvage of nucleosides and nucleotides" /note="go_component: cytoplasm [goid 0005737]; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="guanine-hypoxanthine phosphoribosyltransferase" /protein_id="AAC73342.1" /db_xref="GI:1786433" /db_xref="ASAP:814" /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR" gene 256527..257771 /gene="yafA" /locus_tag="b0239" CDS 256527..257771 /gene="yafA" /locus_tag="b0239" /function="orf; Unknown" /note="putative hydrolase" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73343.1" /db_xref="GI:1786434" /db_xref="ASAP:817" /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA TQAMVWQQKACAEDDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF APRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN PVYRNFDKGLQEITDWIEKRLC" gene 257829..258230 /gene="crl" /locus_tag="b0240" CDS 257829..258230 /gene="crl" /locus_tag="b0240" /function="regulator; Surface structures" /note="transcriptional regulator of cryptic genes for curli formation and fibronectin binding; go_component: fimbria [goid 0009289]; go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="transcriptional regulator of cryptic csgA gene for curli surface fibers" /protein_id="AAC73344.1" /db_xref="GI:1786435" /db_xref="ASAP:821" /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCKDNRFFFDCLAVCVNV KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE FHEKLRELLTTLNLKLEPADDFRDEPVKLTA" gene complement(258269..259324) /gene="phoE" /locus_tag="b0241" /note="synonym: ompE" CDS complement(258269..259324) /gene="phoE" /locus_tag="b0241" /function="membrane; Outer membrane constituents" /note="go_component: external outer membrane (sensu Gram-negative Bacteria) [goid 0009279]" /codon_start=1 /transl_table=11 /product="outer membrane pore protein E (E,Ic,NmpAB)" /protein_id="AAC73345.1" /db_xref="GI:1786436" /db_xref="ASAP:823" /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM SDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF DFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK LNINNDDIVAVGMTYQF" gene 259612..260715 /gene="proB" /locus_tag="b0242" /note="synonym: pro2" CDS 259612..260715 /gene="proB" /locus_tag="b0242" /EC_number="2.7.2.11" /function="enzyme; Amino acid biosynthesis: Proline" /note="go_component: cytoplasm [goid 0005737]; go_process: proline biosynthesis [goid 0006561]" /codon_start=1 /transl_table=11 /product="gamma-glutamate kinase" /protein_id="AAC73346.1" /db_xref="GI:1786437" /db_xref="ASAP:830" /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR" gene 260727..261980 /gene="proA" /locus_tag="b0243" /note="synonym: pro1" CDS 260727..261980 /gene="proA" /locus_tag="b0243" /EC_number="1.2.1.41" /function="enzyme; Amino acid biosynthesis: Proline" /note="go_component: cytoplasm [goid 0005737]; go_process: proline biosynthesis [goid 0006561]" /codon_start=1 /transl_table=11 /product="gamma-glutamylphosphate reductase" /protein_id="AAC73347.1" /db_xref="GI:1786438" /db_xref="ASAP:832" /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR EHGTQHSDAILTRDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH ARGPMGLEALTTYKWIGIGDYTIRA" gene 262095..262170 /gene="thrW" /locus_tag="b0244" tRNA 262095..262170 /gene="thrW" /locus_tag="b0244" /product="tRNA-Thr" /note="codon recognized: ACG; anticodon: CGU threonine tRNA 2; go_component: cytoplasm [goid 0005737]; go_process: tRNA metabolism [goid 0006399]" /anticodon=(pos:262128..262130,aa:Thr) /function="RNA; tRNA" /db_xref="ASAP:834" misc_feature 262182..296489 /note="cryptic prophage CP4-6" /db_xref="ASAP:234205" gene complement(262552..262893) /gene="ykfI" /locus_tag="b0245" CDS complement(262552..262893) /gene="ykfI" /locus_tag="b0245" /function="orf; Unknown" /note="CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73348.1" /db_xref="GI:1786439" /db_xref="ASAP:836" /translation="MKTLPAITQRAVKPCLSPVAVWQMLLTRLLEQHYGLTINDTPFC NEAVIKEHIDAGITLADAVNFLVEKYELVRIDRKGFSWQEQSPYLRAADILRARQATG LLRQSRNNVVR" gene complement(262914..263231) /gene="yafW" /locus_tag="b0246" CDS complement(262914..263231) /gene="yafW" /locus_tag="b0246" /function="orf; Unknown" /note="CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73349.1" /db_xref="GI:1786440" /db_xref="ASAP:838" /translation="MSNPTRGLQREITLRLGARLVQEGNRLHYLADRASITGKFSDIE CRKLDETFPHFILQMESMLTTGELSPHHAHCVTLYHNDLTCEADTLGSCGYVYIAIYP TQR" gene complement(263480..263956) /gene="ykfG" /locus_tag="b0247" CDS complement(263480..263956) /gene="ykfG" /locus_tag="b0247" /function="putative enzyme; Not classified" /note="CP4-6 prophage; putative DNA repair protein" /codon_start=1 /transl_table=11 /product="putative DNA repair protein" /protein_id="AAC73350.1" /db_xref="GI:2367100" /db_xref="ASAP:841" /translation="MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVR EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL" gene complement(263972..264430) /gene="yafX" /locus_tag="b0248" CDS complement(263972..264430) /gene="yafX" /locus_tag="b0248" /function="orf; Unknown" /note="CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73351.1" /db_xref="GI:1786442" /db_xref="ASAP:843" /translation="MTTQTQHDLAPANQPEFELTVTPVPDEQRIDFWPQYFGAIPQWL LLEPHIFAWMDRFCEGYSGGIWSFYTLSNGGAFMSPEPDNDETWRLFNCLNGNDAQMS AEAAGIAVCLIAYSHHACRTECDAMTAHYYRLREYAMQHPEAHAILRIID" gene complement(264528..264767) /gene="ykfF" /locus_tag="b0249" CDS complement(264528..264767) /gene="ykfF" /locus_tag="b0249" /function="orf; Unknown" /note="CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73352.1" /db_xref="GI:1786443" /db_xref="ASAP:846" /translation="MTQSVLLPPGPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDT EGRMVWRAWNFEPDAGEGLNRYIRTSGIRTDTATR" gene complement(264844..265311) /gene="ykfB" /locus_tag="b0250" CDS complement(264844..265311) /gene="ykfB" /locus_tag="b0250" /function="orf; Unknown" /note="CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73353.1" /db_xref="GI:1786444" /db_xref="ASAP:851" /translation="MTILSLSRFMLAGVLLASFNASAIPGFWQQGYGQGNTEYSVTEA SGKTFTINCTGNPDQNGFYQHSVFLTLADDKMVSSHDDDTTITVVMDHQQYIIPSSLG WRNGDNAWFDFISNISEAGQFDVYVNDHKAGTFTADRKNAEKVLSTLGDCSND" gene complement(265334..266191) /gene="yafY" /locus_tag="b0251" CDS complement(265334..266191) /gene="yafY" /locus_tag="b0251" /function="orf; Unknown" /note="EcoGene suggests alternate start codon EcoGene suggests alternate start codon; CP4-6 prophage" /codon_start=1 /transl_table=11 /product="hypothetical transcriptional regulator" /protein_id="AAC73354.1" /db_xref="GI:1786445" /db_xref="ASAP:853" /translation="MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTL RRDFRERLMYLDLEYQSGYCHYRHCCHRHHSEQNRGVRQSRGPDPCHCCRTADGRWRS RCCQCRADTVRRRAGGYFRGHLCLCQSGSSDFRKKIMKRKTLPLLALVATTLFLIACD DRSDDLKAISKFKDLTPPRFSDVVSHQDDVSEEWSQVDYLSGPTLQVLRTRQSPDGCE DGSYYYLVDMQEKTVQPLMNALCIADNIKLEYQEVTDPYTKEKYFEYAHDGKLMGQLL IPSNPDNQE" gene complement(266408..267244) /gene="yafZ" /locus_tag="b0252" CDS complement(266408..267244) /gene="yafZ" /locus_tag="b0252" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73355.1" /db_xref="GI:1786446" /db_xref="ASAP:856" /translation="MRSLLMTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHE SRSERYTYIPTISLLDSLQREGFQPFFACQTRVRDPGRREHTKHMLRLRREGQITGKQ VPEIILLNSHDGTSSYQMLPGLFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYE VLGIFDRVEEKRDAMQSLLLPPPAQQALAKAALTYRFGEDHQPVTESQILSPRRWQDE SNDLWTTYQRIQENLIKGGLSGRNAKGGRSHTRAVRGIDGDVKLNRALWVMAEALLTQ LQ" gene complement(267321..268187) /gene="ykfA" /locus_tag="b0253" CDS complement(267321..268187) /gene="ykfA" /locus_tag="b0253" /function="orf; Not classified" /note="EcoGene suggests alternate start codon; CP4-6 prophage; putative GTP-binding factor" /codon_start=1 /transl_table=11 /product="putative GTP-binding protein" /protein_id="AAC73356.1" /db_xref="GI:1786447" /db_xref="ASAP:858" /translation="MMNNSEGLKSFQQSLADLPQWVSERLLQQINQLTNYEPVIGIMG KTGVGKSSLCNALFAGDISPVSDVAACTREPLRFRLQVGDRYITLMDLPGVGESGARD TEYAALYREQLPRLDLVLWLIKADDRALTVDEHFYHQVIGEVYRHKVLFVISQSDKAE PTSGGGQLSTAQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLKVMAERMIKCLPRE ATSPVVSQLHPSFRTTVVREQARSDFGETVGAVLDSISAFPLIPAPVRAVIQAVRTTV VSVARAVWDFFF" gene complement(268513..269406) /gene="perR" /locus_tag="b0254" CDS complement(268513..269406) /gene="perR" /locus_tag="b0254" /function="putative regulator; Not classified" /note="CP4-6 prophage; putative transcriptional repressor of peroxide resistance (LysR family)" /codon_start=1 /transl_table=11 /product="peroxide resistance protein" /protein_id="AAC73357.1" /db_xref="GI:1786448" /db_xref="ASAP:862" /translation="MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRK LENLLDVRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHTAP SFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPL AVEELTPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFD RSFMAIAAAVDGLGVVLESKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHM HSALDVFKTWLLNELNLGKIR" repeat_region 269430..269994 /insertion_seq="partial" /insertion_seq="IS911A" /db_xref="ASAP:865" gene 269466..269870 /gene="yi91a" /locus_tag="b0255" CDS 269466..269870 /gene="yi91a" /locus_tag="b0255" /function="IS, phage, Tn; Transposon-related functions" /note="CP4-6 prophage; IS911 homolog" /codon_start=1 /transl_table=11 /product="transposase insN for insertion sequence element IS911A" /protein_id="AAC73358.1" /db_xref="GI:1786449" /db_xref="ASAP:867" /translation="MICSPQNNTGVIMKKRNFSAEFKRESAQLVVDQNYTVADAASAM DVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATVD SIGQRNSYVKTWGCGGFLNETNIYSRGKSLCF" repeat_region 269765..270985 /insertion_seq="IS30" /db_xref="ASAP:869" gene 269827..270978 /gene="tra8_1" /locus_tag="b0256" CDS 269827..270978 /gene="tra8_1" /locus_tag="b0256" /function="IS, phage, Tn; Transposon-related functions" /note="CP4-6 prophage; transposase1 for IS30" /codon_start=1 /transl_table=11 /product="IS30 transposase" /protein_id="AAC73359.1" /db_xref="GI:1786450" /db_xref="ASAP:871" /translation="MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDT GGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRR YYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQK TLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPI HERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIIVRLRGKDSVSVNQALT DKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIR QYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD" repeat_region 270930..271751 /insertion_seq="partial" /insertion_seq="IS911A" /db_xref="ASAP:873" gene 271054..271479 /locus_tag="b0257" CDS 271054..271479 /locus_tag="b0257" /function="IS, phage, Tn; Not classified" /note="CP4-6 prophage; IS911, putative transposase" /codon_start=1 /transl_table=11 /product="putative transposase" /protein_id="AAC73360.1" /db_xref="GI:1786451" /db_xref="ASAP:880" /translation="MATLCHVFGVHRSSYKYWKNRPEKPDGRRAVLRSQVLELHGISH GSAGARSIATMATQRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNHLE RQFAVTEPNQVWCGDVTYSVPGVQGGHGCLNEPRVCLEY" gene 272086..273216 /gene="ykfC" /locus_tag="b0258" CDS 272086..273216 /gene="ykfC" /locus_tag="b0258" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; CP4-6 prophage; putative reverse transcriptase" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73361.1" /db_xref="GI:1786452" /db_xref="ASAP:885" /translation="MQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAH TPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALR DRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEG DLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVI SPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCR YADDFVLIVKGTKAQVEAIREECRGVLEGSLKLRLNMDKTKIPHVNDGFIFLGHRLIR KRSRYGEMRVVSTIPQEKARNFAASLTALLWKVRISGEILLG" repeat_region 273179..274373 /insertion_seq="IS5" /db_xref="ASAP:886" gene complement(273325..274341) /gene="trs5_1" /locus_tag="b0259" CDS complement(273325..274341) /gene="trs5_1" /locus_tag="b0259" /function="IS, phage, Tn; Transposon-related functions" /note="CP4-6 prophage; IS5 protein 1" /codon_start=1 /transl_table=11 /product="IS5 transposase" /protein_id="AAC73362.1" /db_xref="GI:1786453" /db_xref="ASAP:888" /translation="MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINI EYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW ERSH" gene 274525..275952 /gene="mmuP" /locus_tag="b0260" /note="synonym: ykfD" CDS 274525..275952 /gene="mmuP" /locus_tag="b0260" /function="putative transport; Not classified" /note="EcoGene suggests alternate start codon; CP4-6 prophage; putative S-methylmethionine transport protein (APC family); go_component: inner membrane [goid 0019866]; go_process: methionine biosynthesis [goid 0009086]" /codon_start=1 /transl_table=11 /product="S-methylmethionine permease" /protein_id="AAC73363.1" /db_xref="GI:1786455" /db_xref="ASAP:893" /translation="MSIRLEGYMQTTQQNAPLKRTMKTRHLIMLSLGGVIGTGLFFNT GYIISTTGAAGTLLAYLIGALVVWLVMQCLGELSVAMPETGAFHVYAARYLGPATGYT VAWLYWLTWTVALGSSFTAAGFCMQYWFPQVPVWVWCVVFCAIIFGLNVISTRFFAEG EFWFSLVKVVTIIAFIILGGAAIFGFIPMQDGSPAPGLSNITAEGWFPHGGLPILMTM VAVNFAFSGTELIGIAAGETENPRKVIPVAIRTTIARLIIFFIGTVFVLAALIPMQQV GVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNERTLPAC FARVTKNGVPLTALSVSMLGGVLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASH FVFRRRHLQQGKALSELHYRAPWYPLVPVLGFVLCLVACVGLAFDPAQRIALWCGLPF VALCYGAYFLTQPRNAKQEPEHVAE" gene 275939..276871 /gene="mmuM" /locus_tag="b0261" /note="synonym: yagD" CDS 275939..276871 /gene="mmuM" /locus_tag="b0261" /EC_number="2.1.1.10" /EC_number="2.1.1." /function="putative enzyme; Not classified" /note="CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase; go_process: glycerol metabolism [goid 0006071]; go_process: methionine biosynthesis [goid 0009086]" /codon_start=1 /transl_table=11 /product="S-methylmethionine:homocysteine methyltransferase" /protein_id="AAC73364.1" /db_xref="GI:1786456" /db_xref="ASAP:895" /translation="MSQNNPLRALLDKQDILLLDGAMATELEARGCNLADSLWSAKVL VENPELIREVHLDYYRAGAQCAITASYQATPAGFAARGLDEAQSKALIGKSVELARKA REAYLAENPQAGTLLVAGSVGPYGAYLADGSEYRGDYHCSVEAFQAFHRPRVEALLDA GADLLACETLPNFSEIEALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVALLAG YPQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQ LADYLPQWQAAGARLIGGCCRTTPADIAALKARS" gene complement(276980..278038) /gene="afuC" /locus_tag="b0262" CDS complement(276980..278038) /gene="afuC" /locus_tag="b0262" /function="putative transport; Not classified" /note="EcoGene suggests alternate start codon; CP4-6 prophage; putative ferric transport protein (ABC superfamily, atp_bind)" /codon_start=1 /transl_table=11 /product="putative ATP-binding component of a transport system" /protein_id="AAC73365.1" /db_xref="GI:1786457" /db_xref="ASAP:898" /translation="MERTMTQKNFVELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGP SGCGKTTILRLVAGLEKPSEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGEN VGYGLKMLGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQQQRVALARALILKPK VLLFDEPLSNLDANLRRSMRDKIRELQKQFDITSLYVTHDQSEAFAVSDTVLVMNKGH IMQIGSPQDLYRQPASRFMASFMGDANLFPATFSDGYVDIYGYHLPRPLHFGTQGEGM VGVRPEAITLSDRGEESQRCVIRHVAYMGPQYEVTVEWHGQEILLQVNATRLQPDVGE QYYLEIHPYGMFVLADAA" gene complement(278038..278400) /gene="afuB" /locus_tag="b0263" CDS complement(278038..278400) /gene="afuB" /locus_tag="b0263" /function="putative transport; Not classified" /note="EcoGene suggests alternate start codon; CP4-6 prophage; putative membrane component of ferric transport system" /codon_start=1 /transl_table=11 /product="putative transport system permease protein, partial" /protein_id="AAC73366.1" /db_xref="GI:1786458" /db_xref="ASAP:900" /translation="MESLPGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALI YSFVRAITTVSAIVFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAIIFIF DWLIGESRTSRSKAKNQA" repeat_region complement(278387..279154) /insertion_seq="IS1" /db_xref="ASAP:902" gene complement(278402..278905) /gene="insB_2" /locus_tag="b0264" CDS complement(278402..278905) /gene="insB_2" /locus_tag="b0264" /function="IS, phage, Tn; Transposon-related functions" /note="CP4-6 prophage; IS1 protein InsB 2" /codon_start=1 /transl_table=11 /product="IS1 protein InsB" /protein_id="AAC73367.1" /db_xref="GI:1786459" /db_xref="ASAP:906" /translation="MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVEQHDKVIGHY LNIKHYQ" gene complement(278824..279099) /gene="insA_2" /locus_tag="b0265" CDS complement(278824..279099) /gene="insA_2" /locus_tag="b0265" /function="IS, phage, Tn; Transposon-related functions" /note="CP4-6 prophage; IS1 protein InsA 2" /codon_start=1 /transl_table=11 /product="IS1 protein InsA" /protein_id="AAC73368.1" /db_xref="GI:1786460" /db_xref="ASAP:909" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR" repeat_region 279155..279335 /insertion_seq="partial" /insertion_seq="IS30" /db_xref="ASAP:910" gene complement(279609..279986) /gene="yagB" /locus_tag="b0266" CDS complement(279609..279986) /gene="yagB" /locus_tag="b0266" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73369.1" /db_xref="GI:1786461" /db_xref="ASAP:912" /translation="MVFFNRNKIMNKDSTQTWGLKRDITPCFGARLVQEGHRLHFLAD RAGFTGSFSEVQTLQLDEAFPHFVAHLELMLLSCELNPRYAHCVTLYRNGLTGEADTL GSHGYVYIAILNRHGFNRHLRVI" gene complement(280053..281207) /gene="yagA" /locus_tag="b0267" CDS complement(280053..281207) /gene="yagA" /locus_tag="b0267" /function="orf; Unknown" /note="CP4-6 prophage; putative transposase" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73370.1" /db_xref="GI:1786462" /db_xref="ASAP:915" /translation="MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATG YKWLQRWAQEGAAGLQDRPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLED QGHTMPAFSTVHNLMARHGLLPGASPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRC HPLTLLDDHSRFSLCLAHCTDERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTTGT WTALELWLMRLGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDH WRTVYNLERPHEALDMAVPGSRYQPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKG VSLSAGKAFRGERVGLKEMQEDGSYEVWWYSTKVGVIDLKKKSITMGKGC" gene 281481..282410 /gene="yagE" /locus_tag="b0268" CDS 281481..282410 /gene="yagE" /locus_tag="b0268" /function="putative enzyme; Not classified" /note="CP4-6 prophage; putative synthase" /codon_start=1 /transl_table=11 /product="putative lyase/synthase" /protein_id="AAC73371.1" /db_xref="GI:1786463" /db_xref="ASAP:921" /translation="MIQQGDLMPQSALFTGIIPPVSTIFTADGQLDKPGTAALIDDLI KAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQ HAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALV KTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNTLLLGGDGA ISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQIPQMYQLDTPFVNVIKEAIVLC GRPVSTHVLPPASPLDEPRKAQLKTLLQQLKLC" gene 282425..284392 /gene="yagF" /locus_tag="b0269" CDS 282425..284392 /gene="yagF" /locus_tag="b0269" /function="putative enzyme; Not classified" /note="CP4-6 prophage; putative dehydratase" /codon_start=1 /transl_table=11 /product="putative dehydratase" /protein_id="AAC73372.1" /db_xref="GI:1786464" /db_xref="ASAP:923" /translation="MTIEKIFTPQDDAFYAVITHAAGPQGALPLTPQMLMESPSGNLF GMTQNAGMGWDANKLTGKEVLIIGTQGGIRAGDGRPIALGYHTGHWEIGMQMQAAAKE ITRNGGIPFAAFVSDPCDGRSQGTHGMFDSLPYRNDAAIVFRRLIRSLPTRRAVIGVA TCDKGLPATMIALAAMHDLPTILVPGGATLPPTVGEDAGKVQTIGARFANHELSLQEA AELGCRACASPGGGCQFLGTAGTSQVVAEALGLALPHSALAPSGQAVWLEIARQSARA VSELDSRGITTRDILSDKAIENAMVIHAAFGGSTNLLLHIPAIAHAAGCTIPDVEHWT RINRKVPRLVSVLPNGPDYHPTVRAFLAGGVPEVMLHLRDLGLLHLDAMTVTGQTVGE NLEWWQASERRARFRQCLREQDGVEPDDVILPPEKAKAKGLTSTVCFPTGNIAPEGSV IKATAIDPSVVGEDGVYHHTGRVRVFVSEAQAIKAIKREEIVQGDIMVVIGGGPSGTG MEETYQLTSALKHISWGKTVSLITDARFSGVSTGACFGHVSPEALAGGPIGKLRDNDI IEIAVDRLTLTGSVNFIGTADNPLTPEEGARELARRQTHPDLHAHDFLPDDTRLWAAL QSVSGGTWKGCIYDTDKIIEVINAGKKALGI" gene 284619..286001 /gene="yagG" /locus_tag="b0270" CDS 284619..286001 /gene="yagG" /locus_tag="b0270" /function="putative transport; Not classified" /note="CP4-6 prophage; putative sugar transport protein" /codon_start=1 /transl_table=11 /product="putative permease" /protein_id="AAC73373.1" /db_xref="GI:1786466" /db_xref="ASAP:929" /translation="MTQLTMKDKIGYGLGDTACGFVWQATMFLLAYFYTDVFGLSAGI MGTLFLVSRVLDAVTDPLMGLLVDRTRTRHGQFRPFLLWGAIPFGIVCVLTFYTPDFS AQGKIIYACVTYILLTLVYTFVNVPYCAMPGVITADPKERHALQSWRFFLAAAGSLAI SGIALPLVSIIGKGDEQVGYFGAMCVLGLSGVVLLYVCFFTTKERYTFEVQPGSSVAK DLKLLLGNSQWRIMCAFKMMATCSNVVRGGATLYFVKYVMDHPELATQFLLYGSLATM FGSLCSSRLLGRFDRVTAFKWIIVAYSLISLLIFVTPAEHIALIFALNILFLFVFNTT TPLQWLMASDVVDYEESRSGRRLDGLVFSTYLFSLKIGLAIGGAVVGWILAYVNYSAS SSVQPVEVLTTIKILFCVVPVVLYAGMFIMLSLYKLTDARVEAISRQLIKHRAAQGEA VPDAATAASH" gene 286013..287623 /gene="yagH" /locus_tag="b0271" CDS 286013..287623 /gene="yagH" /locus_tag="b0271" /EC_number="3.2.1.-" /function="putative enzyme; Not classified" /note="CP4-6 prophage; putative xylosidase/arabinosidase" /codon_start=1 /transl_table=11 /product="putative beta-xylosidase (EC 3.2.1.37)" /protein_id="AAC73374.1" /db_xref="GI:1786467" /db_xref="ASAP:931" /translation="MEITNPILTGFNPDPSLCRQGEDYYIATSTFEWFPGVRIYHSRD LKNWSLVSTPLDRVSMLDMKGNPDSGGIWAPCLSYADGKFWLLYTDVKIVDSPWKNGR NFLVTAPSIEGPWSEPIPMGNGGFDPSLFHDDDGRKYYIYRPWGPRHHSNPHNTIVLQ AFDPQTGTLSPERKTLFTGTPLCYTEGAHLYRHAGWYYLMAAEGGTSYEHAVVVLRSK NIDGPYELHPDVTMMTSWHLPENPLQKSGHGSLLQTHTGEWYMAYLTSRPLRLPGVPL LASGGRGYCPLGRETGIARIEWRDGWPYVEGGKHAQLTVKGPQVAEQPAAVPGNWRDD FDASSLDPELQTLRIPFDDTLGSLTARPGFLRLYGNDSLNSTFTQSTVARRWQHFAFR AETRMEFSPVHFQQSAGLTCYYNSKNWSYCFVDYEEGQGRTIKVIQLDHNVPSWPLHE QPIPVPEHAESVWLRVDVDTLVYRYSYSFDGETWHTVPVTYEAWKLSDDYIGGRGFFT GAFVGLHCEDISGDGCYADFDYFTYEPV" gene complement(287628..288386) /gene="yagI" /locus_tag="b0272" CDS complement(287628..288386) /gene="yagI" /locus_tag="b0272" /function="putative regulator; Not classified" /note="CP4-6 prophage; putative transcriptional regulator (IclR family); go_function: transcriptional repressor activity [goid 0016564]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="putative regulator" /protein_id="AAC73375.1" /db_xref="GI:1786468" /db_xref="ASAP:933" /translation="MPIIQSVERALQILDLFNEQATELKITDISKLMGLSKSTLHSLL KTLQLHGYIDQNPENGKYRLGMKLVERGHFVVGSIDIRQKAKGWLTELSRRTGQTTHL GILDGREGVYIEKIEGKLAAIAYSRIGRRLPVHATAIGKVLIAWLGEAELNALLEGYQ YTTFTPATLASREALMSALAQTREQGYALDSEENEQGVRCVAVPVWNHESRVIAALSL STLTSRVDDAELANFREQLQQAGLALSRALGYPA" gene complement(288525..289529) /gene="argF" /locus_tag="b0273" /note="synonyms: Arg5, argD" CDS complement(288525..289529) /gene="argF" /locus_tag="b0273" /EC_number="2.1.3.3" /function="enzyme; Amino acid biosynthesis: Arginine" /note="CP4-6 prophage; ornithine carbamoyltransferase 2, catalytic chain F; go_component: cytoplasm [goid 0005737]; go_process: arginine biosynthesis [goid 0006526]" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase 2, chain F" /protein_id="AAC73376.1" /db_xref="GI:1786469" /db_xref="ASAP:939" /translation="MSDLYKKHFLKLLDFTPAQFTSLLTLAAQLKADKKNGKEVQKLT GKNIALIFEKDSTRTRCSFEVAAFDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYD GIQYRGHGQEVVETLAQYAGVPVWNGLTNEFHPTQLLADLMTMQEHLPGKAFNEMTLV YAGDARNNMGNSMLEAAALTGLDLRLLAPKACWPEESLVAECSALAEKHGGKITLTED VAAGVKGADFIYTDVWVSMGEAKEKWAERIALLRGYQVNAQMMALTDNPNVKFLHCLP AFHDDQTTLGKQMAKEFDLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMMATLGE " repeat_region complement(289858..290625) /insertion_seq="IS1" /db_xref="ASAP:945" gene complement(289873..290376) /gene="insB_3" /locus_tag="b0274" CDS complement(289873..290376) /gene="insB_3" /locus_tag="b0274" /function="IS, phage, Tn; Transposon-related functions" /note="CP4-6 prophage; IS1 protein InsB" /codon_start=1 /transl_table=11 /product="IS1 protein InsB" /protein_id="AAC73377.1" /db_xref="GI:1786470" /db_xref="ASAP:948" /translation="MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMD EQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVEQHDKVIGHY LNIKHYQ" gene complement(290295..290570) /gene="insA_3" /locus_tag="b0275" CDS complement(290295..290570) /gene="insA_3" /locus_tag="b0275" /function="IS, phage, Tn; Transposon-related functions" /note="CP4-6 prophage; IS1 protein InsA" /codon_start=1 /transl_table=11 /product="IS1 protein InsA" /protein_id="AAC73378.1" /db_xref="GI:1786471" /db_xref="ASAP:951" /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR" gene 290724..291455 /gene="yagJ" /locus_tag="b0276" CDS 290724..291455 /gene="yagJ" /locus_tag="b0276" /function="orf; Unknown" /note="CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73379.1" /db_xref="GI:1786472" /db_xref="ASAP:963" /translation="MEARVTVAGMGLVMEVQDYFDGEADRLAKAWLAEYTPQIKSLKD ERKEAYRQIVEMSTEPQDVDLVRPANKFEMTRVREGEKEADLPVWKHHLLCDESGNYP ALLNHWETKVFEIETKREGFAFWYRNPQYTGQSSLGIAYVEAEQYKIVRPDFLFFAEQ DGKMVVDLVDPHSLHLADALPKLEGLALYAEHHSDAYRRIESVAEVKGKLRVLDLKRQ DVQDAVATAENAETLFSSGLADDYQ" gene complement(291546..292172) /gene="yagK" /locus_tag="b0277" CDS complement(291546..292172) /gene="yagK" /locus_tag="b0277" /function="orf; Unknown" /note="CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73380.1" /db_xref="GI:1786473" /db_xref="ASAP:965" /translation="MKTYQGTHGVHILEYQSKINKLLCYLTNRYPRLIAVRVDLHYPK IVDNGDNICCFPNLEPGVISRMRESLRAKLEADRTRKVREDKRIYRCPLFIIWAKEYS ESGKCHYHICLLFNKDAYYHLGDYDQDDNLRGMITGAWYSALRLERDDHPGLVHFPEN CKYVLDTNSTDFQQNYQALLTRLDYLTKVESKVFGEGDRNFGCSQIEL" gene complement(292444..293142) /gene="yagL" /locus_tag="b0278" CDS complement(292444..293142) /gene="yagL" /locus_tag="b0278" /function="phenotype; Not classified" /note="CP4-6 prophage; DNA-binding protein" /codon_start=1 /transl_table=11 /product="DNA-binding protein" /protein_id="AAC73381.1" /db_xref="GI:1786474" /db_xref="ASAP:970" /translation="MRGKILLYQLKYRWQSLSIFGCFLCKMTLFRYQKIIYDTGVHQM RSFFYTICSSEQQESITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIH HEMNRQDTLVIPDLSCLGRTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFL IARQDTIDIHNLKSTKSRYRHVKKKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSIS LSTVKRHWNNGIIG" gene complement(293169..294023) /gene="yagM" /locus_tag="b0279" CDS complement(293169..294023) /gene="yagM" /locus_tag="b0279" /function="orf; Unknown" /note="CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73382.1" /db_xref="GI:2367101" /db_xref="ASAP:972" /translation="MSNSVTNFEMSSVLPGKKPCQGKNNESQVVQTTPIKKHSVTFKN QSSLGVIDHYARLTNKSHSSVIAEVVDLAIPILEKCNRHNWSINEIKNDLLKFSIKES INRSRGKTEVTLEEYCSLIWKTNIMSPLKIPIADYFQLNANDEFMGKDEKTVIRERLS SLRENYDMEKAIYIYNQRHFDVKHQSVSGYSNIILIHRTTFEGYYFDAGQALLLSTSQ LIIFGINEVLRRKGIVMPYPVVCWIDIYHVNEMVVMLPVLRKTDVSNRVNVPDDIIIN PYSQESRT" gene complement(294363..294803) /gene="yagN" /locus_tag="b0280" CDS complement(294363..294803) /gene="yagN" /locus_tag="b0280" /function="orf; Unknown" /note="CP4-6 prophage" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73383.1" /db_xref="GI:2367102" /db_xref="ASAP:976" /translation="MATPATVSIEPTLAAIRARWCINSSKTTQSFNDPASMEEVVEYL KGTYSALRKSVACAKLKILHLKQRMQNATNFLARLMSCKNQASRSHHSTAKSAKSALS SDSGDGSDPDPEPETFPSAFITTPTNSIMLKAFFANISITEVAK" gene complement(294920..296320) /gene="intF" /locus_tag="b0281" CDS complement(294920..296320) /gene="intF" /locus_tag="b0281" /function="IS, phage, Tn; Not classified" /note="CP4-6 prophage; putative phage integrase" /codon_start=1 /transl_table=11 /product="putative phage integrase" /protein_id="AAC73384.1" /db_xref="GI:2367104" /db_xref="ASAP:979" /translation="MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLP EGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEAR RLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKR PYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQ NRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKE QLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGE RIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPH ISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETW ILNEAGITIKNNVDMR" gene complement(296605..297015) /gene="yagP" /locus_tag="b0282" CDS complement(296605..297015) /gene="yagP" /locus_tag="b0282" /function="putative regulator; Not classified" /note="putative periplasmic regulator; go_process: regulation of transcription, DNA-dependent [goid 0006355]" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator LYSR-type" /protein_id="AAC73385.1" /db_xref="GI:1786476" /db_xref="ASAP:982" /translation="MPAPVVLILAAGRGECFLASGGNTHKCIGWRQSPEVAPYRWPFE ENGRTFDLAIEPQITTNDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDFLP QFPGFYLYFPQRRNIAPKLRALIDYVKEWRQQLA" gene complement(296994..297950) /gene="yagQ" /locus_tag="b0283" CDS complement(296994..297950) /gene="yagQ" /locus_tag="b0283" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73386.1" /db_xref="GI:1786477" /db_xref="ASAP:984" /translation="MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLV TLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGE GSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPVGLRYDPQAQSLVCLPTQ TRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQID TDTAVILLCHDLNRELPVLQAAREAKPFYLGALGSYRTHTLRLQKLHELGWSREETTQ IRAPVGIFPKARDAHTLALSVLAEVASVRLHQEEDSCLPPSS" gene complement(297960..300158) /gene="yagR" /locus_tag="b0284" CDS complement(297960..300158) /gene="yagR" /locus_tag="b0284" /function="orf; Unknown" /note="putative molybdemum cofactor-binding oxidoreductase" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73387.1" /db_xref="GI:1786478" /db_xref="ASAP:988" /translation="MKFDKPAGENPIDQLKVVGRPHDRIDGPLKTTGTARYAYEWHEE APNAAYGYIVGSAIAKGRLTALDTDAAQKAPGVLAVITASNAGALGKGDKNTARLLGG PTIEHYHQAIALVVAETFEQARAAASLVQAHYRRNKGAYSLADEKQAVNQPPEDTPDK NVGDFDGAFTSAAVKIDATYTTPDQSHMAMEPHASMAVWDGNKLTLWTSNQMIDWCRT DLAKTLKVPVENVRIISPYIGGGFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIP NNTTHRPATLQHLRIGADQSGKITAISHESWSGNLPGGTPETAVQQSELLYAGANRHT GLRLATLDLPEGNAMRAPGEAPGLMALEIAIDELAEKAGIDPVEFRILNDTQVDPADP TRCFSRRQLIECLRTGADKFGWKQRNATPGQVRDGEWLVGHGVAAGFRNNLLEKSGAR VHLEQNGTVTVETDMTDIGTGSYTILAQTAAEMLGVPLEQVAVHLGDSSFPVSAGSGG QWGANTSTSGVYAACMKLREMIASAVGFDPEQSQFADGKITNGTRSATLHEATAGGRL TAEESIEFGTLSKEYQQSTFAGHFVEVGVHSATGEVRVRRMLAVCAAGRILNPKTARS QVIGAMTMGMGAALMEELAVDDRLGYFVNHDMAGYEVPVHADIPKQEVIFLDDTDPIS SPMKAKGVGELGLCGVSAAIANAVYNATGIRVRDYPITLDKLLDKLPDVV" gene complement(300155..301111) /gene="yagS" /locus_tag="b0285" CDS complement(300155..301111) /gene="yagS" /locus_tag="b0285" /function="orf; Unknown" /note="putative oxidoreductase, FAD-binding domain" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73388.1" /db_xref="GI:1786479" /db_xref="ASAP:990" /translation="MKAFTYERVNTPAEAALSAQRVPGAKFIAGGTNLLDLMKLEIET PTHLIDVNGLGLDKIEVTDAGGLRIGALVRNTDLAAHERVRRDYAVLSRALLAGASGQ LRNQATTAGNLLQRTRCPYFYDTNQPCNKRLPGSGCAALEGFSRQHAVVGVSEACIAT HPSDMAVAMRLLDAVVETITPEGKTRSITLADFYHPPGKTPHIETALLPGELIVAVTL PPPLGGKHIYRKVRDRASYAFALVSVAAIIQPDGSGRVALGGVAHKPWRIEAADAQLS QGAQAVYDTLFASAHPTAENTFKLLLAKRTLASVLAEARAQA" gene complement(301108..301797) /gene="yagT" /locus_tag="b0286" CDS complement(301108..301797) /gene="yagT" /locus_tag="b0286" /function="putative enzyme; Not classified" /note="putative oxidoreductase, Fe-S subunit" /codon_start=1 /transl_table=11 /product="putative xanthine dehydrogenase (EC 1.1.1.20)" /protein_id="AAC73389.1" /db_xref="GI:1786480" /db_xref="ASAP:992" /translation="MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPH STLAASVPAATPAPEIMPLTLKVNGKTEQLEVDTRTTLLDTLRENLHLIGTKKGCDHG QCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGY CTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILA AIEDAAGEIKS" gene 302215..302829 /gene="yagU" /locus_tag="b0287" CDS 302215..302829 /gene="yagU" /locus_tag="b0287" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73390.1" /db_xref="GI:1786481" /db_xref="ASAP:995" /translation="MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSP VDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWV GVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDL PWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGSNR" gene complement(303077..303406) /gene="ykgJ" /locus_tag="b0288" CDS complement(303077..303406) /gene="ykgJ" /locus_tag="b0288" /function="putative carrier; Not classified" /note="go_function: electron carrier activity [goid 0009055]" /codon_start=1 /transl_table=11 /product="putative ferredoxin" /protein_id="AAC73391.1" /db_xref="GI:2367105" /db_xref="ASAP:997" /translation="MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPF HRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARA KYGLTPL" gene complement(303719..304474) /gene="yagV" /locus_tag="b0289" CDS complement(303719..304474) /gene="yagV" /locus_tag="b0289" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73392.1" /db_xref="GI:1786482" /db_xref="ASAP:1000" /translation="MITAGLAKSALQERFMFRRRGVTLTKALLTAVCMLAAPLTQAIS VGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDGELLFAPR QLALQAGESEYFKFYYHGPRDNRERYYRVSFREVPTRNHTRRSPTGGVVSTEPVVVMD TILVVRPRQVQFKWSFDKVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVH QPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD" gene complement(304398..306041) /gene="yagW" /locus_tag="b0290" CDS complement(304398..306041) /gene="yagW" /locus_tag="b0290" /function="putative factor; Not classified" /note="conserved protein" /codon_start=1 /transl_table=11 /product="putative receptor" /protein_id="AAC73393.1" /db_xref="GI:1786483" /db_xref="ASAP:1002" /translation="MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENN SDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDM WLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLS DAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANL RLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSI HIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNF FKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYT QTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGK AKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVK FSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN" gene complement(306031..308556) /gene="yagX" /locus_tag="b0291" CDS complement(306031..308556) /gene="yagX" /locus_tag="b0291" /function="putative enzyme; Not classified" /note="conserved protein" /codon_start=1 /transl_table=11 /product="putative enzyme" /protein_id="AAC73394.1" /db_xref="GI:1786484" /db_xref="ASAP:1005" /translation="MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQ AFSQALQDGMSVPLYIHLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASV SEQTRQQLMALANAPFNEALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSED IGQSSVNTLSSNLSYNLGVYNNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIG SGQQDSELYKAMYERDFAGHRFAGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASST IFDSSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEV IVNGRVISKRTQRVNKLFSRGRGVGAPLAWQVWGGSFHMDRWSENGKKTRPAKESWLA GASTSGSLSTLSWAATGYGYDNQAVGETRLTLPLGGAINVNLQNMLASDSSWSSIGSI SATLPGGFSSLWVNQEKTRIGNQLRRSDADNRAIGGTLNLNSLWSKLGTFSISYNDDR RYNSHYYTADYYQNVYSGTFGSLGLRAGIQRYNNGDSNANTGKYIALDLSLPLGNWFS AGMTHQNGYTMANLSARKQFDEGTIRTVGANLSRAISGDTGDDKTLSGGAYAQFDARY ASGTLNVNSAADGYVNTNLTANGSVGWQGKNIAASGRTDGNAGVIFNTGLEDDGQISA KINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSYDIVSGRKSRLTLYPGNVAVI EPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFRYS GNKTCEVALELNQARGAVWVGDVVCSGLSSWAAVTQTGEENES" gene complement(308582..309250) /gene="yagY" /locus_tag="b0292" CDS complement(308582..309250) /gene="yagY" /locus_tag="b0292" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73395.1" /db_xref="GI:1786485" /db_xref="ASAP:1007" /translation="MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNS TDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPAD EKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKF IPVK" gene complement(309308..309895) /gene="yagZ" /locus_tag="b0293" CDS complement(309308..309895) /gene="yagZ" /locus_tag="b0293" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73396.1" /db_xref="GI:1786486" /db_xref="ASAP:1009" /translation="MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSK LVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSG STLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSII SGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS" gene complement(309970..310560) /gene="ykgK" /locus_tag="b0294" CDS complement(309970..310560) /gene="ykgK" /locus_tag="b0294" /function="putative regulator; Not classified" /note="conserved protein" /codon_start=1 /transl_table=11 /product="putative regulator" /protein_id="AAC73397.1" /db_xref="GI:2367106" /db_xref="ASAP:1011" /translation="MTWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIV DIDRLIYLSLEKIRKDFVFINLSTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALA NYWYYNSNIRGVVYAGLSRDIRKELVYVINGRFLRKDIKKDKITDREMEIIRMTAQGM QPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ" gene 311336..311563 /gene="ykgL" /locus_tag="b0295" CDS 311336..311563 /gene="ykgL" /locus_tag="b0295" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73398.1" /db_xref="GI:2367107" /db_xref="ASAP:1019" /translation="MQAAPQREETEWRVQSKRGLMPAYRGEAGQQVNIKIMEYSERNV RQLASNEQEEYIPRKINVGVINTPTLIRSDY" gene complement(311738..312001) /gene="ykgM" /locus_tag="b0296" CDS complement(311738..312001) /gene="ykgM" /locus_tag="b0296" /function="putative structure; Not classified" /note="go_component: cytosolic ribosome (sensu Bacteria) [goid 0009281]" /codon_start=1 /transl_table=11 /product="putative ribosomal protein" /protein_id="AAC73399.1" /db_xref="GI:2367109" /db_xref="ASAP:1021" /translation="MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPY VTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGA" gene 313581..314468 /gene="eaeH" /locus_tag="b0297" CDS 313581..314468 /gene="eaeH" /locus_tag="b0297" /function="factor; Not classified" /note="outer membrane protein important for attachment to cell, pathogenesis factor; go_component: external outer membrane (sensu Gram-negative Bacteria) [goid 0009279]" /codon_start=1 /transl_table=11 /product="attaching and effacing protein, pathogenesis factor" /protein_id="AAC73400.1" /db_xref="GI:1786488" /db_xref="ASAP:1025" /translation="MSHYKTGHKQPRFRYSVLARCVAWANISVQVLFPLAVTFTPVMA ARAQHAVQPRLSMGNTTVTADNNVEKNVASFAANAGTFLSSQPDSDATRNFITGMATA KANQEIQEWLGKYGTARVKLNVDKDFSLKDSSLEMLYPIYDTPTNMLFTQGAIHRTDD RTQSNIGFGWRHFSGNDWMAGVNTFIDHDLSRSHTRIGVGAEYWRDYLKLSANGYIRA SGWKKSPDIEDYQERPANGWDIRAEGYLPAWPQLGASLMYEQYYGDEVGLFGKDKRQK DPHAISAEVTYTPVPLTQQ" repeat_region 314453..315707 /insertion_seq="IS3" /db_xref="ASAP:1026" gene 314506..314814 /locus_tag="b0298" CDS 314506..314814 /locus_tag="b0298" /function="putative factor; Not classified" /note="putative transposase-related protein" /codon_start=1 /transl_table=11 /product="transposase insE for insertion sequence IS3" /protein_id="AAC73401.1" /db_xref="GI:1786489" /db_xref="ASAP:1028" /translation="MTHMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSL YESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK " gene 314811..315677 /gene="tra5_5" /locus_tag="b0299" CDS 314811..315677 /gene="tra5_5" /locus_tag="b0299" /function="IS, phage, Tn; Transposon-related functions" /note="putative IS tranposase" /codon_start=1 /transl_table=11 /product="transposase insF for insertion sequence IS3" /protein_id="AAC73402.1" /db_xref="GI:1786490" /db_xref="ASAP:1030" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene complement(315674..316393) /gene="ykgA" /locus_tag="b0300" CDS complement(315674..316393) /gene="ykgA" /locus_tag="b0300" /function="putative regulator; Not classified" /note="putative transcriptional regulator (AraC/XylS family); go_function: transcriptional repressor activity [goid 0016564]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="putative ARAC-type regulatory protein" /protein_id="AAC73403.1" /db_xref="GI:1786491" /db_xref="ASAP:1032" /translation="MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGY SRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSRE FKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEV SNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADM PKEWTTTRGLYDPTHVIWTQA" gene complement(316950..317552) /gene="ykgB" /locus_tag="b0301" CDS complement(316950..317552) /gene="ykgB" /locus_tag="b0301" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; putative membrane protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73404.1" /db_xref="GI:1786492" /db_xref="ASAP:1038" /translation="MFTMEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEAD SITPFVANSPLMSFFYEHPEDYKQYLTHEGEYKPEARAWQTANNTYGFSNGLGVVEVI IALLVLANPVNRWLGLLGGLMAFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAG RLVLKDTLMLAGAVMIMADSAREILKQRSNESSSTLKTEY" gene complement(317555..317806) /gene="ykgI" /locus_tag="b0303" CDS complement(317555..317806) /gene="ykgI" /locus_tag="b0303" /function="orf; Unknown" /note="EcoGene suggests alternate start codon the overlapping ORF b0302 on the opposite strand is no longer thought to be an actual gene, and has been deaccessioned; unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73406.1" /db_xref="GI:1786494" /db_xref="ASAP:1043" /translation="MMVFYMFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSAS PTVLEDTIADIARKYNASSWKVTSMRIDNNSTATAVLYK" gene complement(317900..319252) /gene="ykgC" /locus_tag="b0304" CDS complement(317900..319252) /gene="ykgC" /locus_tag="b0304" /function="putative enzyme; Not classified" /note="EcoGene suggests alternate start codon; putative oxidoreductase, FAD/NAD(P)-binding" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC73407.1" /db_xref="GI:1786495" /db_xref="ASAP:1048" /translation="MNAFRQEIIMNKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQS NAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRNKNFHNLADMPNID VIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGL LNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATIL RDQGVDIILNAHVERISHHENQVQVHSEHAQLAVDALLIASGRQPATASLHPENAGIA VNERGAIVVDKRLHTTADNIWAMGDVTGGLQFTYISLDDYRIVRDELLGEGKRSTDDR KNVPYSVFMTPPLSRVGMTEEQARESGADIQVVTLPVAAIPRARVMNDTRGVLKAIVD NKTQRMLGASLLCVDSHEMINIVKMVMDAGLPYSILRDQIFTHPSMSESLNDLFSLVK " gene 319451..320305 /gene="ykgD" /locus_tag="b0305" CDS 319451..320305 /gene="ykgD" /locus_tag="b0305" /function="putative regulator; Not classified" /note="putative transcriptional regulator (AraC/XylS family); go_function: transcriptional activator activity [goid 0016563]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="putative ARAC-type regulatory protein" /protein_id="AAC73408.1" /db_xref="GI:1786496" /db_xref="ASAP:1054" /translation="MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHAL TQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFL TSLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREW IAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVS GTTPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVREFGCTPGEYR ERVRQLAP" gene 320832..321551 /gene="ykgE" /locus_tag="b0306" CDS 320832..321551 /gene="ykgE" /locus_tag="b0306" /function="putative enzyme; Not classified" /note="putative oxidoreductase" /codon_start=1 /transl_table=11 /product="putative dehydrogenase subunit" /protein_id="AAC73409.1" /db_xref="GI:1786497" /db_xref="ASAP:1058" /translation="MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQ PAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAA KVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGL ELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVAHLMEVRPEYLIGADVSCLLNISG RLQREGQKVKVMHIAEVLMSR" gene 321562..322989 /gene="ykgF" /locus_tag="b0307" CDS 321562..322989 /gene="ykgF" /locus_tag="b0307" /function="orf; Unknown" /note="putative dehydrogenase" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73410.1" /db_xref="GI:1786498" /db_xref="ASAP:1060" /translation="MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDE LGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVYFARTKEDATRYILQVAQ RKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHK DRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCL VTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTG PREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYG SIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDNVCPVRIPLSKLILRHRRVMAEK GITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEAR DLPEADGESFRSWFKKHQAQEKKNG" gene 322829..323677 /gene="ykgG" /locus_tag="b0308" CDS 322829..323677 /gene="ykgG" /locus_tag="b0308" /function="putative transport; Not classified" /note="EcoGene suggests alternate start codon; conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="putative transporter" /protein_id="AAC73411.1" /db_xref="GI:1786499" /db_xref="ASAP:1062" /translation="MLMRQAGLSMAAKHHSNLARLATGWKHAIFLKLTERVSVVGLRN IRRRRKRMDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFI QFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNA VVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLPEYSLFIL RKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVY LIIEDC" gene complement(323632..323844) /locus_tag="b0309" CDS complement(323632..323844) /locus_tag="b0309" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73412.1" /db_xref="GI:1786500" /db_xref="ASAP:1064" /translation="MDACLFHCKYPGIGNTRIFTEEQHNHDGTGLSQVVLNAIFNLVC LLQVYVQTSYLSQQSSIIRYTAFTGP" gene complement(323920..324588) /gene="ykgH" /locus_tag="b0310" CDS complement(323920..324588) /gene="ykgH" /locus_tag="b0310" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73413.1" /db_xref="GI:1786502" /db_xref="ASAP:1066" /translation="MREQIKQDIDLIEILFYLKKKIRVILFIMAICMAMVLLFLYINK DNIKVIYSLKINQTTPGILVSCDSNNNFACQTTMTEDVIQRITTFFHTSPDVKNREIR LEWSGDKRALPTAEEEISRVQASIIKWYASEYHNGRQVLDEIQTPSAINSELYTKMIY LTRNWSLYPNGDGCVTISSPEIKNKYPAAICLALGFFLSIVISVMFCLVKKMVDEYQQ NSGQ" gene complement(324801..326471) /gene="betA" /locus_tag="b0311" CDS complement(324801..326471) /gene="betA" /locus_tag="b0311" /EC_number="1.1.99.1" /function="enzyme; Osmotic adaptation" /note="go_component: inner membrane [goid 0019866]; go_process: betaine biosynthesis [goid 0006578]; go_process: response to osmotic stress [goid 0006970]" /codon_start=1 /transl_table=11 /product="choline dehydrogenase, a flavoprotein" /protein_id="AAC73414.1" /db_xref="GI:1786503" /db_xref="ASAP:1070" /translation="MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFR TQMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNAL DLDNWAQEPGLENWSYLDCLPYYRKAETRDMGENDYHGGDGPVSVTTSKPGVNPLFEA MIEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRT HAMTDHIIFDGKRAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAE LLAEFDIPLVHELPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGG TGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSP SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISP GVECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIM PQIITGNLNATTIMIGEKIADMIRGQEALPRSTAGYFVANGMPVRAKK" gene complement(326485..327957) /gene="betB" /locus_tag="b0312" CDS complement(326485..327957) /gene="betB" /locus_tag="b0312" /EC_number="1.2.1.8" /function="enzyme; Osmotic adaptation" /note="go_process: betaine biosynthesis [goid 0006578]; go_process: response to osmotic stress [goid 0006970]" /codon_start=1 /transl_table=11 /product="NAD+-dependent betaine aldehyde dehydrogenase" /protein_id="AAC73415.1" /db_xref="GI:1786504" /db_xref="ASAP:1072" /translation="MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGRE DVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETS TVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIAL WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTE HPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMM ANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHR DNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTIVREEIFGPV MSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAE MPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKFQSIF" gene complement(327971..328558) /gene="betI" /locus_tag="b0313" CDS complement(327971..328558) /gene="betI" /locus_tag="b0313" /function="putative regulator; Osmotic adaptation" /note="transcriptional repressor for the cellular response to osmotic stress (TetR/AcrR family); go_function: transcriptional repressor activity [goid 0016564]; go_process: transcription [goid 0006350]; go_process: response to osmotic stress [goid 0006970]" /codon_start=1 /transl_table=11 /product="probably transcriptional repressor of bet genes" /protein_id="AAC73416.1" /db_xref="GI:1786505" /db_xref="ASAP:1076" /translation="MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTG IISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQVS SAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPREQAQEAGYGLAAL IDGLWLRAALSGKPLDKTRANSLTRHFITQHLPTD" gene 328687..330720 /gene="betT" /locus_tag="b0314" CDS 328687..330720 /gene="betT" /locus_tag="b0314" /function="transport; Transport of small molecules: Other" /note="high-affinity choline transport protein (BCCT family); go_component: inner membrane [goid 0019866]; go_process: betaine biosynthesis [goid 0006578]" /codon_start=1 /transl_table=11 /product="high-affinity choline transport" /protein_id="AAC73417.1" /db_xref="GI:1786506" /db_xref="ASAP:1080" /translation="MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIG RTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFA AGIGIDLMFFSVAEPVTQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMA LGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLN YGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVL FMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFV GLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHP ERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWL RVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRE SANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRG AYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGFTYRARSGKSTYYR LETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA" gene 331595..332683 /gene="yahA" /locus_tag="b0315" CDS 331595..332683 /gene="yahA" /locus_tag="b0315" /function="orf; Unknown" /note="putative transcriptional repressor (LuxR/UhpA family); go_process: regulation of transcription, DNA-dependent [goid 0006355]" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73418.1" /db_xref="GI:1786507" /db_xref="ASAP:1086" /translation="MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTE ISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDN HYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFI PLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNL VNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQA FPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKG VHFLQGYLYSPPVPGNKFISEWVMKAGG" gene complement(332725..333657) /gene="yahB" /locus_tag="b0316" CDS complement(332725..333657) /gene="yahB" /locus_tag="b0316" /function="putative regulator; Not classified" /note="putative transcriptional regulator (LysR family); go_function: transcriptional activator activity [goid 0016563]; go_function: transcriptional repressor activity [goid 0016564]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator LYSR-type" /protein_id="AAC73419.1" /db_xref="GI:1786508" /db_xref="ASAP:1088" /translation="MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRME TGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICIN QLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGG GIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH GQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT QHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN" gene complement(333749..334246) /gene="yahC" /locus_tag="b0317" CDS complement(333749..334246) /gene="yahC" /locus_tag="b0317" /function="orf; Unknown" /note="putative membrane protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73420.1" /db_xref="GI:1786509" /db_xref="ASAP:1091" /translation="MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCS FYAAGGGKSGFIRSLAVNYSGMVWAFFAALTAGWLASVSGLSAFWASVITTVPFSAVV VWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGVISEYGGQKLSEATT KRDGY" gene 334504..335109 /gene="yahD" /locus_tag="b0318" CDS 334504..335109 /gene="yahD" /locus_tag="b0318" /function="putative regulator; Not classified" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="putative transcription factor" /protein_id="AAC73421.1" /db_xref="GI:1786511" /db_xref="ASAP:1095" /translation="MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAIT LASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVT RFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIV QLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA" gene 335149..336012 /gene="yahE" /locus_tag="b0319" CDS 335149..336012 /gene="yahE" /locus_tag="b0319" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73422.1" /db_xref="GI:1786512" /db_xref="ASAP:1097" /translation="MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEE YDNAPNSCRLALTHFDDLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAV NFHLIAWLQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNI ASAVASMMGLGIGLTPSADDYLTGLALILFIPGHPAEKYKEEFYLGLQRGKNNTTLLS AITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCA LSQTYGGNYVS" gene 336002..337549 /gene="yahF" /locus_tag="b0320" CDS 336002..337549 /gene="yahF" /locus_tag="b0320" /function="putative enzyme; Not classified" /note="putative acyl-CoA synthetase" /codon_start=1 /transl_table=11 /product="putative oxidoreductase subunit" /protein_id="AAC73423.1" /db_xref="GI:1786513" /db_xref="ASAP:1099" /translation="MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNK GVLKNLGLLTPELEQAKNGDLMIVINGKSGADNEQLLVEIEELFNTKAQSGSHEARYA TIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAH EKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQ LIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAVARKVLERARACRK PVVVCFLDRGETPVDEQGLQFARGTKEAALKAVMLSGVKQENLDLHTLNQPLIADVRA RLQPQQKYIRGLFCGGTLCDETMFAVMEKHGDVYSNIQPDPEFRLKDINRSIKHTFLD FGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIETI KEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREF ICKGEEA" gene 337549..338967 /gene="yahG" /locus_tag="b0321" CDS 337549..338967 /gene="yahG" /locus_tag="b0321" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73424.1" /db_xref="GI:1786514" /db_xref="ASAP:1101" /translation="MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNM QVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAG PPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGV TSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDA MKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEF VASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPA QQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSR QMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAG IVHPPFACFEKAILGWCERYGV" gene 339389..340339 /gene="yahI" /locus_tag="b0323" CDS 339389..340339 /gene="yahI" /locus_tag="b0323" /function="putative enzyme; Not classified" /note="putative carbamate kinase; go_process: arginine biosynthesis [goid 0006526]; go_process: pyrimidine nucleotide biosynthesis [goid 0006221]" /codon_start=1 /transl_table=11 /product="putative kinase (EC 2.7.2.2)." /protein_id="AAC73426.1" /db_xref="GI:1786516" /db_xref="ASAP:1107" /translation="MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASD YDIVLTHGNGPQVGLDLRRAEIAHKREGLPLTPLANCVADTQGGIGYLIQQALNNRLA RHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSDSQRDELQKANPDWCFVEDAGRG YRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDL STALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSML PKIIASLTFLEQGGKEVIITTPECLPAALRGETGTHIIKT" gene 340349..341731 /gene="yahJ" /locus_tag="b0324" CDS 340349..341731 /gene="yahJ" /locus_tag="b0324" /function="putative enzyme; Not classified" /note="go_process: amine catabolism [goid 0009310]" /codon_start=1 /transl_table=11 /product="putative deaminase" /protein_id="AAC73427.1" /db_xref="GI:1786517" /db_xref="ASAP:1109" /translation="MKESNSRREFLSQSGKMVTAAALFGTSVPLAHAAVAGTLNCEAN NTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKLHPDAT LPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQP YTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFP QHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHL HETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELANRMVVQQISI ASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNE QNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHK GQLVWGSVAG" gene 342108..343157 /gene="yahK" /locus_tag="b0325" CDS 342108..343157 /gene="yahK" /locus_tag="b0325" /function="putative enzyme; Not classified" /note="putative dehydrogenase, NAD(P)-binding" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAC73428.1" /db_xref="GI:1786518" /db_xref="ASAP:1113" /translation="MKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDL HQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDG LENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAG ITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALG ADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKS PEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRG DVKYRFVIDNRTLTD" gene 343400..344215 /gene="yahL" /locus_tag="b0326" CDS 343400..344215 /gene="yahL" /locus_tag="b0326" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73429.1" /db_xref="GI:1786519" /db_xref="ASAP:1117" /translation="MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFK VLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMD YPDHPVKFVFHILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDC KCILLEYHMPLLRIFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYP VFPESLVMLLLSVLDVKTYRDDARLNEWISNRVQELGDRYYPVNKHVKIRYTL" gene 344598..344873 /gene="yahM" /locus_tag="b0327" CDS 344598..344873 /gene="yahM" /locus_tag="b0327" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73430.1" /db_xref="GI:1786521" /db_xref="ASAP:1120" /translation="MLYGTGFEASMAVQLFKTLLNQIPLLSSLQSGTLPLFGYSGWGR PMKKAHTGESGLKWEAKDSSKLIGNKDHALRGLSSPMAVIRQIRLIT" gene complement(344890..345561) /gene="yahN" /locus_tag="b0328" CDS complement(344890..345561) /gene="yahN" /locus_tag="b0328" /function="putative enzyme; Not classified" /note="putative transport protein" /codon_start=1 /transl_table=11 /product="putative cytochrome subunit of dehydrogenase" /protein_id="AAC73431.1" /db_xref="GI:1786522" /db_xref="ASAP:1122" /translation="MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQT SLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAW CSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTW ARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYE GVTQR" gene 345708..345983 /gene="yahO" /locus_tag="b0329" CDS 345708..345983 /gene="yahO" /locus_tag="b0329" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73432.1" /db_xref="GI:1786523" /db_xref="ASAP:1130" /translation="MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDIS TSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK" gene complement(346081..347667) /gene="prpR" /locus_tag="b0330" CDS complement(346081..347667) /gene="prpR" /locus_tag="b0330" /function="regulator; Not classified" /note="transcriptional activator of propionate catabolism (EBP family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional repressor activity [goid 0016564]; go_process: fatty acid oxidation [goid 0019395]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="regulator for prp operon" /protein_id="AAC73433.1" /db_xref="GI:1786524" /db_xref="ASAP:1133" /translation="MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQL GFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGK LTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAG LITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDM LGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSH PFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLP LQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILR LQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRE LRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDK TAAANYLGISRTTFWRRLKS" gene 347906..348796 /gene="prpB" /locus_tag="b0331" CDS 347906..348796 /gene="prpB" /locus_tag="b0331" /EC_number="3.1.3.16" /function="putative enzyme; Not classified" /note="putative carboxyphosphonoenolpyruvate mutase; go_component: cytoplasm [goid 0005737]; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="putative phosphonomutase 2" /protein_id="AAC73434.1" /db_xref="GI:1786525" /db_xref="ASAP:1138" /translation="MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYL SGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVK SMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTD ALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATP LFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYES INYYQYEEKLDNLFARSQVK" gene 349236..350405 /gene="prpC" /locus_tag="b0333" CDS 349236..350405 /gene="prpC" /locus_tag="b0333" /EC_number="4.1.3.7" /function="putative enzyme; Not classified" /note="methylcitrate synthase (citrate synthase 2); go_component: cytoplasm [goid 0005737]; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="putative citrate synthase; propionate metabolism?" /protein_id="AAC73436.1" /db_xref="GI:1786527" /db_xref="ASAP:1148" /translation="MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHY RGYDILDLAKHCEFEEVAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPA ASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERI QPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSD MYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPV YTIADPRHQVIKRVAKQLSQEGGSLKMYNIADRLETVMWESKKMFPNLDWFSAVSYNM MGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYVGPEDRPFVALDKRQ" gene 350439..351890 /gene="prpD" /locus_tag="b0334" CDS 350439..351890 /gene="prpD" /locus_tag="b0334" /function="orf; Unknown" /note="2-methyl citrate dehydratase; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73437.1" /db_xref="GI:1786528" /db_xref="ASAP:1152" /translation="MSAQINNIRPEFDREIVDIVDYVMNYEISSKVAYDTAHYCLLDT LGCGLEALEYPACKKLLGPIVPGTVVPNGVRVPGTQFQLDPVQAAFNIGAMIRWLDFN DTWLAAEWGHPSDNLGGILATADWLSRNAVASGKAPLTMKQVLTAMIKAHEIQGCIAL ENSFNRVGLDHVLLVKVASTAVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTG TRKSWAAGDATSRAVRLALMAKTGEMGYPSALTAPVWGFYDVSFKGESFRFQRPYGSY VMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACIRIIDK KGPLNNPADRDHCIQYMVAIPLLFGRLTAADYEDNVAQDKRIDALREKINCFEDPAFT ADYHDPEKRAIANAITLEFTDGTRFEEVVVEYPIGHARRRQDGIPKLVDKFKINLARQ FPTRQQQRILEVSLDRARLEQMPVNEYLDLYVI" gene 351930..353816 /gene="prpE" /locus_tag="b0335" CDS 351930..353816 /gene="prpE" /locus_tag="b0335" /function="putative enzyme; Not classified" /note="putative acetyl-CoA synthetase of the propionate catabolism operon; go_component: cytoplasm [goid 0005737]; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="putative propionyl-CoA synthetase" /protein_id="AAC73438.1" /db_xref="GI:1786529" /db_xref="ASAP:1154" /translation="MSFSEFYQRSINEPEQFWAEQARRIDWQTPFTQTLDHSNPPFAR WFCEGRTNLCHNAIDRWLEKQPEALALIAVSSETEEERTFTFRQLHDEVNAVASMLRS LGVQRGDRVLVYMPMIAEAHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIV SADAGARGGKIIPYKKLLDDAISQAQHQPRHVLLVDRGLAKMARVSGRDVDFASLRHQ HIGARVPVAWLESNETSCILYTSGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGSV FFCASDIGWVVGHSYIVYAPLLAGMATIVYEGLPTWPDCGVWWTIVEKYQVSRMFSAP TAIRVLKKFPTAEIRKHDLSSLEVLYLAGEPLDEPTASWVSNTLDVPVIDNYWQTESG WPIMAIARGLDDRPTRLGSPGVPMYGYNVQLLNEVTGEPCGVNEKGMLVVEGPLPPGC IQTIWGDDGRFVKTYWSLFSRPVYATFDWGIRDADGYHFILGRTDDVINVAGHRLGTR EIEESISSHPGVAEVAVVGVKDALKGQVAVAFVIPKESDSLEDRDVAHSQEKAIMALV DSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLDQIRQ AMEE" gene 354146..355405 /gene="codB" /locus_tag="b0336" CDS 354146..355405 /gene="codB" /locus_tag="b0336" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="cytosine transport protein (NCS1 family); go_component: inner membrane [goid 0019866]; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="cytosine permease/transport" /protein_id="AAC73439.1" /db_xref="GI:1786530" /db_xref="ASAP:1159" /translation="MSQDNNFSQGPVPQSARKGVLALTFVMLGLTFFSASMWTGGTLG TGLSYHDFFLAVLIGNLLLGIYTSFLGYIGAKTGLTTHLLARFSFGVKGSWLPSLLLG GTQVGWFGVGVAMFAIPVGKATGLDINLLIAVSGLLMTVTVFFGISALTVLSVIAVPA IACLGGYSVWLAVNGMGGLDALKAVVPAQPLDFNVALALVVGSFISAGTLTADFVRFG RNAKLAVLVAMVAFFLGNSLMFIFGAAGAAALGMADISDVMIAQGLLLPAIVVLGLNI WTTNDNALYASGLGFANITGMSSKTLSVINGIIGTVCALWLYNNFVGWLTFLSAAIPP VGGVIIADYLMNRRRYEHFATTRMMSVNWVAILAVALGIAAGHWLPGIVPVNAVLGGA LSYLILNPILNRKTTAAMTHVEANSVE" gene 355395..356678 /gene="codA" /locus_tag="b0337" CDS 355395..356678 /gene="codA" /locus_tag="b0337" /EC_number="3.5.4.1" /function="enzyme; Salvage of nucleosides and nucleotides" /note="go_component: cytoplasm [goid 0005737]; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="cytosine deaminase" /protein_id="AAC73440.1" /db_xref="GI:1786531" /db_xref="ASAP:1161" /translation="MSNNALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITE NSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVK QRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGI LSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDE IDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVAN PLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHM GLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSANLIILPAENGFDALRRQ VPVRYSVRGGKVIASTQPAQTTVYLEQPEAIDYKR" gene complement(357015..357914) /gene="cynR" /locus_tag="b0338" CDS complement(357015..357914) /gene="cynR" /locus_tag="b0338" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="transcriptional regulator of cyanate metabolism (LysR family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_function: transcriptional repressor activity [goid 0016564]; go_process: transcription [goid 0006350]; go_process: xenobiotic metabolism [goid 0006805]" /codon_start=1 /transl_table=11 /product="cyn operon positive regulator" /protein_id="AAC73441.1" /db_xref="GI:1786533" /db_xref="ASAP:1165" /translation="MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLG VPLFDRSGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFT SYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPL LTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVV IEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQT AAAKAFLHMALDKCAVVGGNESR" gene 358023..358682 /gene="cynT" /locus_tag="b0339" CDS 358023..358682 /gene="cynT" /locus_tag="b0339" /EC_number="4.2.1.1" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="go_component: cytoplasm [goid 0005737]; go_process: cyanate catabolism [goid 0009440]; go_process: xenobiotic metabolism [goid 0006805]" /codon_start=1 /transl_table=11 /product="carbonic anhydrase" /protein_id="AAC73442.1" /db_xref="GI:1786534" /db_xref="ASAP:1171" /translation="MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRL VPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCG AMTAIASCQCMDHMPAVSHWLRYADSARVVNEARPHSDLPSKAAAMVRENVIAQLANL QTHPSVRLALEEGRIALHGWVYDIESGSIAAFDGATRQFVPLAANPRVCAIPLRQPTA A" gene 358713..359183 /gene="cynS" /locus_tag="b0340" CDS 358713..359183 /gene="cynS" /locus_tag="b0340" /EC_number="4.3.99.1" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="cyanate aminohydrolase (cyanase); go_process: cyanate catabolism [goid 0009440]; go_process: nitrogen metabolism [goid 0006807]; go_process: xenobiotic metabolism [goid 0006805]" /codon_start=1 /transl_table=11 /product="cyanate aminohydrolase, cyanase" /protein_id="AAC73443.1" /db_xref="GI:1786535" /db_xref="ASAP:1173" /translation="MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVT AALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQ VYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF" gene 359216..360370 /gene="cynX" /locus_tag="b0341" CDS 359216..360370 /gene="cynX" /locus_tag="b0341" /function="transport; Transport of small molecules: Anions" /note="cyanate transport protein (MFS family); go_component: inner membrane [goid 0019866]; go_process: cyanate catabolism [goid 0009440]; go_process: xenobiotic metabolism [goid 0006805]" /codon_start=1 /transl_table=11 /product="cyanate transport" /protein_id="AAC73444.1" /db_xref="GI:1786536" /db_xref="ASAP:1175" /translation="MLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALP VVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGI GIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWW ALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAW LPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFC GFIWLPMQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAG LAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPVRFPQLWVKEA" gene complement(360473..361084) /gene="lacA" /locus_tag="b0342" CDS complement(360473..361084) /gene="lacA" /locus_tag="b0342" /EC_number="2.3.1.18" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="go_component: cytoplasm [goid 0005737]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="thiogalactoside acetyltransferase" /protein_id="AAC73445.1" /db_xref="GI:1786537" /db_xref="ASAP:1177" /translation="MNMPMTERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEV EKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNV LIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGA GSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYFKDYKVESSV" gene complement(361150..362403) /gene="lacY" /locus_tag="b0343" CDS complement(361150..362403) /gene="lacY" /locus_tag="b0343" /function="transport; Transport of small molecules: Carbohydrates, organic acids, alcohols" /note="go_component: inner membrane [goid 0019866]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="galactoside permease (lactose permease, M protein) (MFS family)" /protein_id="AAC73446.1" /db_xref="GI:1786538" /db_xref="ASAP:1181" /translation="MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSD TGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYN ILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGI MFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFR QPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIM FFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCF KYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGF TLISVFTLSGPGPLSLLRRQVNEVA" gene complement(362455..365529) /gene="lacZ" /locus_tag="b0344" CDS complement(362455..365529) /gene="lacZ" /locus_tag="b0344" /EC_number="3.2.1.23" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="go_component: cytoplasm [goid 0005737]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="beta-D-galactosidase" /protein_id="AAC73447.1" /db_xref="GI:1786539" /db_xref="ASAP:1183" /translation="MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEAR TDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYT NVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWV GYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHK PTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFG GEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFR EVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSH YPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRN HPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVD EDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGG FVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQ QQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIE LPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPH LTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSE ATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKT YRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAA CFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETS HRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK" gene complement(365652..366734) /gene="lacI" /locus_tag="b0345" CDS complement(365652..366734) /gene="lacI" /locus_tag="b0345" /function="regulator; Degradation of small molecules: Carbon compounds" /note="transcriptional repressor of lactose catabolism (GalR/LacI family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional repressor activity [goid 0016564]; go_process: carbohydrate catabolism [goid 0016052]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="transcriptional repressor of the lac operon" /protein_id="AAC73448.1" /db_xref="GI:1786540" /db_xref="ASAP:1189" /translation="MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAE LNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERS GVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSII FSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREG DWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDT EDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNT QTASPRALADSLMQLARQVSRLESGQ" gene complement(366811..367758) /gene="mhpR" /locus_tag="b0346" CDS complement(366811..367758) /gene="mhpR" /locus_tag="b0346" /function="regulator; Not classified" /note="transcriptional activator for 3-hydroxyphenylpropionate degradation (IclR family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_process: fatty acid oxidation [goid 0019395]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="transcriptional regulator for mhp operon" /protein_id="AAC73449.1" /db_xref="GI:1786541" /db_xref="ASAP:1191" /translation="MIFYCALSIGRVFSATIKTCPNVHQVHHVVLTIEMSINMQNNEQ TEYKTVRGLTRGLMLLNMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQEEGYVRRS PSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVSTLDVDAMVVRE TTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQDRKELIEMLASRPGDDYQLAR EPLKLEAILARARKEGYGQNYRGWDQEEKIASIAVPLRSEQRVIGCLNLVYMASAMTI EQAAEKHLPALQRVAKQIEEGVESQAILVAGRRSGMHLR" gene 367835..369499 /gene="mhpA" /locus_tag="b0347" CDS 367835..369499 /gene="mhpA" /locus_tag="b0347" /EC_number="1.14.13.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="3-(3-hydroxy-phenyl)propionate hydroxylase, FAD/NAD(P)-binding; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="3-(3-hydroxyphenyl)propionate hydroxylase" /protein_id="AAC73450.1" /db_xref="GI:1786543" /db_xref="ASAP:1196" /translation="MAIQHPDIQPAVNHSVQVAIAGAGPVGLMMANYLGQMGIDVLVV EKLDKLIDYPRAIGIDDEALRTMQSVGLVDDVLPHTTPWHAMRFLTPKGRCFADIQPM TDEFGWPRRNAFIQPQVDAVMLEGVSRFPNVRCLFSRELEAFSQQDDEVTLHLKTAEG QREIVKAQWLVACDGGASFVRRTLNVPFEGKTAPNQWIVVDIANDPLSTPHIYLCCDP VRPYVSAALPHAVRRFEFMVMPGETEEQLREPQNMRKLLSKVLPNPDNVELIRQRVYT HNARLAQRFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALVIQGKARDAL LDTYQQERRDHAKAMIDLSVTAGNVLAPPKRWQGTLRDGVSWLLNYLPPVKRYFLEMR FKPMPQYYGGALMREGEAKHSPVGKMFIQPKVTLENGDVTLLDNAIGANFAVIGWGCN PLWGMSDEQIQQWRALGTRFIQVVPEVQIHTAQDNHDGVLRVGDTQGRLRSWFAQHNA SLVVMRPDRFVAATAIPQTLGKTLNKLASVMTLTRPDADVSVEKVA" gene 369501..370445 /gene="mhpB" /locus_tag="b0348" CDS 369501..370445 /gene="mhpB" /locus_tag="b0348" /EC_number="1.13.11.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="2,3-dihydroxyphenylpropionate 1,2-dioxygenase" /protein_id="AAC73451.1" /db_xref="GI:1786544" /db_xref="ASAP:1198" /translation="MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPE LVVLFAPDHYNGFFYDVMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSG IDLAVSYCMQVDHGFAQPLEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGR FTSTLNKRVLFLGSGGLSHQPPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVIS AAEKFVEDQRTLHPLNPIWDNQFMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWV AAFAAISAFGNWRSEGRYYRPIPEWIAGFGSLSARTEN" gene 370400..371329 /gene="mhpC" /locus_tag="b0349" CDS 370400..371329 /gene="mhpC" /locus_tag="b0349" /EC_number="3.7.1.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="EcoGene suggests alternate start codon; 2-hydroxy-6-ketonone-2,4-dienedioic acid hydrolase; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase" /protein_id="AAC73452.1" /db_xref="GI:1786545" /db_xref="ASAP:1201" /translation="MDCRIWLVKRQNRELNMQEKMMSYQPQTEAATSRFLNVEEAGKT LRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDS VVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGG GTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNML SRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIA GSELHIFRDCGHWAQWEHADAFNQLVLNFLARP" gene 371333..372148 /gene="mhpD" /locus_tag="b0350" /note="synonym: mhpS" CDS 371333..372148 /gene="mhpD" /locus_tag="b0350" /EC_number="4.2.1.80" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="EcoGene suggests alternate start codon; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="2-keto-4-pentenoate hydratase" /protein_id="AAC73453.1" /db_xref="GI:1786546" /db_xref="ASAP:1205" /translation="MVMTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQ HINVQHDVAQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVL QPRIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADN ASCGVYVIGGPAQRPAGLDLKNCAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMA SLGEPLRTGDIILTGALGPMVAVNAGDRFEAHIEGIGSVAATFSSAAPKGSLS" gene 372145..373095 /gene="mhpF" /locus_tag="b0351" CDS 372145..373095 /gene="mhpF" /locus_tag="b0351" /EC_number="4.1.3.-" /EC_number="1.2.1.10" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="acetaldehyde-CoA dehydrogenase II, NAD-binding; go_component: cytoplasm [goid 0005737]; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="acetaldehyde dehydrogenase" /protein_id="AAC73454.1" /db_xref="GI:1786547" /db_xref="ASAP:1207" /translation="MSKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGL ARARRMGVATTHEGVIGLMNMPEFADIDIVFDATSAGAHVKNDAALREAKPDIRLIDL TPAAIGPYCVPVVNLEANVDQLNVNMVTCGGQATIPMVAAVSRVARVHYAEIIASIAS KSAGPGTRANIDEFTETTSRAIEVVGGAAKGKAIIVLNPAEPPLMMRDTVYVLSDEAS QDDIEASINEMAEAVQAYVPGYRLKQRVQFEVIPQDKPVNLPGVGQFSGLKTAVWLEV EGAAHYLPAYAGNLDIMTSSALATAEKMAQSLARKAGEAA" gene 373092..374105 /gene="mhpE" /locus_tag="b0352" CDS 373092..374105 /gene="mhpE" /locus_tag="b0352" /EC_number="4.1.3.-" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="4-hyroxy-2-oxovalerate/4-hydroxy-2-keto-pentanoic acid aldolase, class I aldolase; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="4-hydroxy-2-ketovalerate aldolase" /protein_id="AAC73455.1" /db_xref="GI:1786548" /db_xref="ASAP:1209" /translation="MNGKKLYISDVTLRDGMHAIRHQYSLENVRQIAKALDDARVDSI EVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIHDLKNAWQA GARVVRVATHCTEADVSAQHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGA TCIYVVDSGGAMNMSDIRDRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCD RIDASLAGMGAGAGNAPLEVFIAAADKLGWQHGTDLYALMDAADDLVRPLQDRPVRVD RETLALGYAGVYSSFLRHCETAAARYGLSAVDILVELGKRRMVGGQEDMIVDVALDLR NNK" gene 374638..375894 /gene="mhpT" /locus_tag="b0353" CDS 374638..375894 /gene="mhpT" /locus_tag="b0353" /function="putative transport; Not classified" /note="EcoGene suggests alternate start codon; putative 3-hydroxyphenylpropionic transport protein (MFS family); go_component: inner membrane [goid 0019866]; go_process: fatty acid oxidation [goid 0019395]" /codon_start=1 /transl_table=11 /product="putative transport protein" /protein_id="AAC73456.1" /db_xref="GI:1786549" /db_xref="ASAP:1213" /translation="MYQSRFTCTRNEVHLMSTRTPSSSSSRLMLTIGLCFLVALMEGL DLQAAGIAAGGIAQAFALDKMQMGWIFSAGILGLLPGALVGGMLADRYGRKRILIGSV ALFGLFSLATAIAWDFPSLVFARLMTGVGLGAALPNLIALTSEAAGPRFRGTAVSLMY CGVPIGAALAATLGFAGANLAWQTVFWVGGVVPLILVPLLMRWLPESAVFAGEKQSAP PLRALFAPETATATLLLWLCYFFTLLVVYMLINWLPLLLVEQGFQPSQAAGVMFALQM GAASGTLMLGALMDKLRPVTMSLLIYSGMLASLLALGTVSSFNGMLLAGFVAGLFATG GQSVLYALAPLFYSSQIRATGVGTAVAVGRLGAMSGPLLAGKMLALGTGTVGVMAASA PGILVAGLAVFILMSRRSRIQPCADA" gene 375879..376535 /gene="yaiL" /locus_tag="b0354" CDS 375879..376535 /gene="yaiL" /locus_tag="b0354" /function="putative enzyme; Not classified" /note="EcoGene suggests alternate start codon; go_component: cytoplasm [goid 0005737]" /codon_start=1 /transl_table=11 /product="nucleoprotein/polynucleotide-associated enzyme" /protein_id="AAC73457.1" /db_xref="GI:1786550" /db_xref="ASAP:1216" /translation="MRRCLTCLIRQGRKGLHPNTPTAFTGILAKNYSAGLETKMAKLT LQEQLLKAGLVTSKKAAKVERTAKKSRVQAREARAAVEENKKAQLERDKQLSEQQKQA ALAKEYKAQVKQLIEMNRITIANGDIGFNFTDGNLIKKIFVDKLTQAQLINGRLAIAR LLVDNNSEGEYAIIPASVADKIAQRDASSIVLHSALSAEEQDEDDPYADFKVPDDLMW " gene complement(376759..377592) /gene="frmB" /locus_tag="b0355" /note="synonym: yaiM" CDS complement(376759..377592) /gene="frmB" /locus_tag="b0355" /EC_number="3.1.1.1" /codon_start=1 /transl_table=11 /product="putative S-formylglutathione hydrolase" /protein_id="AAC73458.1" /db_xref="GI:1786551" /db_xref="ASAP:1219" /translation="MELIEKHVSFGGWQNMYRHYSQSLKCEMNVGVYLPPKAANEKLP VLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGF YLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPD EYVSVSAFSPIVSPSQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRVAEIMVDQG LSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNM R" gene complement(377686..378795) /gene="frmA" /locus_tag="b0356" /note="synonym: adhC" CDS complement(377686..378795) /gene="frmA" /locus_tag="b0356" /EC_number="1.1.1.1" /EC_number="1.2.1.1" /function="enzyme; Energy metabolism, carbon: Fermentation" /note="go_component: cytoplasm [goid 0005737]; go_process: fermentation [goid 0006113]" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent" /protein_id="AAC73459.1" /db_xref="GI:1786552" /db_xref="ASAP:1221" /translation="MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDA FTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGK TNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEAN HEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID TNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALES AHRGWGQSVIIGVAVAGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGD IDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIRY" gene complement(378830..379126) /gene="frmR" /locus_tag="b0357" /note="synonym: yaiN" CDS complement(378830..379126) /gene="frmR" /locus_tag="b0357" /note="EcoGene suggests alternate start codon" /codon_start=1 /transl_table=11 /product="repressor of frmRAB" /protein_id="AAC73460.1" /db_xref="GI:1786553" /db_xref="ASAP:1226" /translation="MQMMRCEMPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRA ILQQIAAVRGAANGLMAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK" gene complement(379293..380066) /gene="yaiO" /locus_tag="b0358" CDS complement(379293..380066) /gene="yaiO" /locus_tag="b0358" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73461.1" /db_xref="GI:1786555" /db_xref="ASAP:1230" /translation="MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAY AELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTP VFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTH YDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQR IQPLTEQLNLGLTAGKVWYDTPTDDFNGLQLAARLTWKF" gene complement(380068..380511) /locus_tag="b0359" CDS complement(380068..380511) /locus_tag="b0359" /function="putative enzyme; Not classified" /note="putative acyl transferase" /codon_start=1 /transl_table=11 /product="putative transferase" /protein_id="AAC73462.1" /db_xref="GI:1786556" /db_xref="ASAP:1232" /translation="MSGDSGGQSSNYAFIRPGTIISNGVKIGFATEIKNAVIEAEATI GPQCFIADSVVANQAYLGAQVRTSNHRLDEQPVSVRTPEGIIATGCDKLGCYIGQRSR LGVQVIILPGRIISPNTQLGPRVIVERNLPTGTYSLRQELIRTGD" repeat_region complement(380484..381814) /insertion_seq="IS2" /db_xref="ASAP:1235" gene 380530..380940 /gene="yi21_1" /locus_tag="b0360" CDS 380530..380940 /gene="yi21_1" /locus_tag="b0360" /function="IS, phage, Tn; Transposon-related functions" /note="IS21 protein 1" /codon_start=1 /transl_table=11 /product="IS2 hypothetical protein" /protein_id="AAC73463.1" /db_xref="GI:1786557" /db_xref="ASAP:1237" /translation="MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPG MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLL GKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE" gene 380898..381803 /gene="yi22_1" /locus_tag="b0361" CDS 380898..381803 /gene="yi22_1" /locus_tag="b0361" /function="IS, phage, Tn; Transposon-related functions" /note="IS22 protein 1" /codon_start=1 /transl_table=11 /product="IS2 hypothetical protein" /protein_id="AAC73464.1" /db_xref="GI:1786558" /db_xref="ASAP:1239" /translation="MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRS RHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLE PKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSAL GYRSPREYLRQRACNGLSDNRCLEI" gene complement(381728..382114) /locus_tag="b0362" CDS complement(381728..382114) /locus_tag="b0362" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73465.1" /db_xref="GI:1786559" /db_xref="ASAP:1241" /translation="MPSGLFMDLLPFLLDANLSATNPPAIPHWWKRQPLIPNLLSQEL KNYLKLNVKEKNIQIADQVIIDETAGEVVIGANTRICHGAVIQGPVVIGANCLIGNWI CPYISRHLLSLNPLQARCRRYSRGER" gene complement(381963..383159) /gene="yaiP" /locus_tag="b0363" CDS complement(381963..383159) /gene="yaiP" /locus_tag="b0363" /function="putative enzyme; Not classified" /note="putative enzyme in polysaccharide metabolism; go_process: polysaccharide biosynthesis [goid 0000271]" /codon_start=1 /transl_table=11 /product="polysaccharide metabolism" /protein_id="AAC73466.1" /db_xref="GI:1786560" /db_xref="ASAP:1243" /translation="MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPC LAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALM NGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHI RATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTL VANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIF PMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLL VPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGT EKLSEA" gene complement(383283..383693) /gene="yaiS" /locus_tag="b0364" CDS complement(383283..383693) /gene="yaiS" /locus_tag="b0364" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73467.1" /db_xref="GI:1786561" /db_xref="ASAP:1249" /translation="MVMTTGNSGTDGIIDRHEESRNALKILGCHQTIHLNFADTRAHL QLNDMISALEDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGY ETPSTWLSFMPQVFESVKEEYFTVKLAALKKHKS" gene 384399..385418 /gene="tauA" /locus_tag="b0365" CDS 384399..385418 /gene="tauA" /locus_tag="b0365" /function="transport; Transport of small molecules: Amino acids, amines" /note="EcoGene suggests alternate start codon; taurine transport protein (ABC superfamily, peri_bind); go_component: periplasmic space [goid 0042597]; go_process: sulfur metabolism [goid 0006790]; go_process: amine catabolism [goid 0009310]" /codon_start=1 /transl_table=11 /product="taurine transport system periplasmic protein" /protein_id="AAC73468.1" /db_xref="GI:1786562" /db_xref="ASAP:1256" /translation="MNVFIPEYCSHNKTGEQTIMAISSRNTLLAALAFIAFQAQAVNV TVAYQTSAEPAKVAQADNTFAKESGATVDWRKFDSGASIVRALASGDVQIGNLGSSPL AVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAAL KHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQW GAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPDVWLKQPENISKLARLSG VPEGDVPGLVKGNTYLTPQQQTAELTGPVNKAIIDTAQFLKEQGKVPAVANDYSQYVT SRFVQ" gene 385431..386198 /gene="tauB" /locus_tag="b0366" CDS 385431..386198 /gene="tauB" /locus_tag="b0366" /function="transport; Transport of small molecules: Amino acids, amines" /note="taurine transport protein (ABC superfamily, atp_bind); go_component: cytoplasm [goid 0005737]; go_process: sulfur metabolism [goid 0006790]; go_process: amine catabolism [goid 0009310]" /codon_start=1 /transl_table=11 /product="taurine ATP-binding component of a transport system" /protein_id="AAC73469.1" /db_xref="GI:1786563" /db_xref="ASAP:1259" /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK MQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFA RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS" gene 386195..387022 /gene="tauC" /locus_tag="b0367" CDS 386195..387022 /gene="tauC" /locus_tag="b0367" /function="transport; Transport of small molecules: Amino acids, amines" /note="taurine transport protein (ABC superfamily, membrane); go_component: inner membrane [goid 0019866]; go_process: sulfur metabolism [goid 0006790]; go_process: amine catabolism [goid 0009310]" /codon_start=1 /transl_table=11 /product="taurine transport system permease protein" /protein_id="AAC73470.1" /db_xref="GI:1786564" /db_xref="ASAP:1261" /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVATL QLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAASLTRIMLALFAAVLFGIPVG IAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS ALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ" gene 387019..387870 /gene="tauD" /locus_tag="b0368" CDS 387019..387870 /gene="tauD" /locus_tag="b0368" /EC_number="1.-" /function="putative enzyme; Not classified" /note="go_process: amine catabolism [goid 0009310]; go_process: sulfur metabolism [goid 0006790]" /codon_start=1 /transl_table=11 /product="taurine dioxygenase, 2-oxoglutarate-dependent" /protein_id="AAC73471.1" /db_xref="GI:1786565" /db_xref="ASAP:1263" /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV TFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFP EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES EALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGD KPFYRAG" gene complement(387977..388984) /gene="hemB" /locus_tag="b0369" /note="synonym: ncf" CDS complement(387977..388984) /gene="hemB" /locus_tag="b0369" /EC_number="4.2.1.24" /function="enzyme; Biosynthesis of cofactors, carriers: Heme, porphyrin" /note="EcoGene suggests alternate start codon; 5-aminolevulinate dehydratase (porphobilinogen synthase)" /codon_start=1 /transl_table=11 /product="5-aminolevulinate dehydratase = porphobilinogen synthase" /protein_id="AAC73472.1" /db_xref="GI:1786566" /db_xref="ASAP:1266" /translation="MPLDSTNIRQTMTDLIQRPRRLRKSPALRAMFEETTLSLNDLVL PIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSD AWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGK QAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREA AGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTEL PIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKIL R" gene complement(389121..389390) /locus_tag="b0370" CDS complement(389121..389390) /locus_tag="b0370" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73473.1" /db_xref="GI:1786567" /db_xref="ASAP:1269" /translation="MLRYRRMVQLFFPLSPNVDIYNLWRKTRIKFIKAQYFNMLQIIL FLKHTHNKYHKHKPDKYPMNMQQSFNYSIYSSATKLQKIITNSYK" gene 389475..390935 /gene="yaiT" /locus_tag="b0371" CDS 389475..390935 /gene="yaiT" /locus_tag="b0371" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73474.1" /db_xref="GI:1786569" /db_xref="ASAP:1274" /translation="MHSWKKKLVVSQLALACTLAITSQANAANYDTWTYIDNPVTALD WDHMDKAGTVDGNYVNYSGFVYYNNTNGDFDQSFNGDTVNGTISTYYLNHDYADSTAN QLDISNSVIHGSITSMLPGGYYDRFDADGNNLGGYDFYTDAVVDTHWRDGDVFTLNIA NTTIDDDYEALYFTDSYKDGDVTKHTNETFDTSEGVAVNLDVESNINISNNSRVAGIA LSQGNTYNETYTTESHTWDNNISVKDSTVTSGSNYILDSNTYGKTGHFGNSDEPSDYA GPGDVAMSFTASGSDYAMKNNVFLSNSTLMGDVAFTSTWNSNFDPNGHDSNGDGVKDT NGGWTDDSLNVDELNLTLDNGSKWVGQAIYNVAETSAMYDVATNSLTPDATYENNDWK RVVDDKVFQSGVFNVALNNGSEWDTTGRSIVDTLTVNNGSQVNVSESKLTSDTIDLTN GSSLNIGEDGYVDTDHLTINSYSTVALTESTGWGAD" repeat_region complement(390933..392190) /insertion_seq="IS3" /db_xref="ASAP:1275" gene complement(390963..391829) /gene="tra5_1" /locus_tag="b0372" CDS complement(390963..391829) /gene="tra5_1" /locus_tag="b0372" /function="IS, phage, Tn; Transposon-related functions" /note="putative transposase 5 of IS3" /codon_start=1 /transl_table=11 /product="transposase insF for insertion sequence IS3" /protein_id="AAC73475.1" /db_xref="GI:1786570" /db_xref="ASAP:1277" /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF SPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGG LSPEQFENKNLA" gene complement(391826..392134) /locus_tag="b0373" CDS complement(391826..392134) /locus_tag="b0373" /function="putative factor; Not classified" /note="putative transposase-related protein" /codon_start=1 /transl_table=11 /product="transposase insE for insertion sequence IS3" /protein_id="AAC73476.1" /db_xref="GI:1786571" /db_xref="ASAP:1279" /translation="MTHMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSL YESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK " gene 392239..393642 /gene="yaiU" /locus_tag="b0374" CDS 392239..393642 /gene="yaiU" /locus_tag="b0374" /function="putative structure; Not classified" /note="flagellar protein; go_component: flagellum [goid 0019861]; go_process: flagella biogenesis [goid 0009296]; go_process: taxis [goid 0042330]" /codon_start=1 /transl_table=11 /product="putative flagellin structural protein" /protein_id="AAC73477.1" /db_xref="GI:1786572" /db_xref="ASAP:1288" /translation="MDVNVDQFDTEAFRTDKLELTSGNIADHNGNVVSGVFDIHSSDY VLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDNGTELDNSSVDNVVAAT GNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATFSAANKADLGAYTYQAEQRGNTV VLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNF NGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTA YIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKL GDAGYVTPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQAL TPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGG GDVDQDWSANVGVKYTW" gene 393685..394353 /gene="yaiV" /locus_tag="b0375" CDS 393685..394353 /gene="yaiV" /locus_tag="b0375" /function="orf; Unknown" /note="putative outer membrane protein, cAMP-binding; go_component: external outer membrane (sensu Gram-negative Bacteria) [goid 0009279]" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73478.1" /db_xref="GI:1786573" /db_xref="ASAP:1290" /translation="MPVKDLTGITAKDAQMLSVVKPLQEFGKLDKCLSRYGTRFEFNN EKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLI SEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRAT LLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRL PSEY" gene complement(394354..395511) /gene="ampH" /locus_tag="b0376" /note="synonym: yaiH" CDS complement(394354..395511) /gene="ampH" /locus_tag="b0376" /function="putative enzyme; Not classified" /note="beta-lactamase/D-ala carboxypeptidase, penicillin-binding protein; go_process: response to drug [goid 0042493]" /codon_start=1 /transl_table=11 /product="beta-lactamase/D-ala carboxypeptidase , penicilling binding protein" /protein_id="AAC73479.1" /db_xref="GI:1786574" /db_xref="ASAP:1292" /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGF ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS" gene 395863..397083 /gene="sbmA" /locus_tag="b0377" CDS 395863..397083 /gene="sbmA" /locus_tag="b0377" /function="putative membrane; Drug/analog sensitivity" /note="microcin B17 transport protein (ABC superfamily, atp_bind and membrane); go_component: inner membrane [goid 0019866]; go_process: response to drug [goid 0042493]" /codon_start=1 /transl_table=11 /product="sensitivity to microcin B17, possibly envelop protein" /protein_id="AAC73480.1" /db_xref="GI:1786575" /db_xref="ASAP:1297" /translation="MFKSFFPKPGTFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ IPISAARFWSLDFLIFYAYYIVCVGLFALFWFIYSPHRWQYWSILGTALIIFVTWFLV EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIA FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE LDGDKIQEVTHTLS" gene 397096..398190 /gene="yaiW" /locus_tag="b0378" CDS 397096..398190 /gene="yaiW" /locus_tag="b0378" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73481.1" /db_xref="GI:1786576" /db_xref="ASAP:1299" /translation="MSRVNPLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ KMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLINMVPM GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE LATRKLAAKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAETKTGKSLPREMLPGI QLESPKITRNLTTAWFAKRVDERRARCMKQ" gene complement(398249..398557) /gene="yaiY" /locus_tag="b0379" CDS complement(398249..398557) /gene="yaiY" /locus_tag="b0379" /function="orf; Unknown" /note="putative membrane protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73482.1" /db_xref="GI:1786577" /db_xref="ASAP:1302" /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ " gene 398685..399029 /gene="yaiZ" /locus_tag="b0380" CDS 398685..399029 /gene="yaiZ" /locus_tag="b0380" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73483.1" /db_xref="GI:1786578" /db_xref="ASAP:1307" /translation="MNLRCESQNGNLKLNLLTITKMLSTPQTVVAEYARMLFFVNGAA MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVGLVTWVISFWLAGLI IRRRDEETENAQ" gene complement(399053..400147) /gene="ddlA" /locus_tag="b0381" CDS complement(399053..400147) /gene="ddlA" /locus_tag="b0381" /EC_number="6.3.2.4" /function="enzyme; Murein sacculus, peptidoglycan" /note="go_component: cytoplasm [goid 0005737]; go_process: peptidoglycan biosynthesis [goid 0009252]" /codon_start=1 /transl_table=11 /product="D-alanine-D-alanine ligase A" /protein_id="AAC73484.1" /db_xref="GI:1786579" /db_xref="ASAP:1309" /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVI FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT LTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA SGLGYTDLITRLIELALERHAADNALKTTM" gene 400610..400870 /gene="yaiB" /locus_tag="b0382" CDS 400610..400870 /gene="yaiB" /locus_tag="b0382" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73485.1" /db_xref="GI:1786581" /db_xref="ASAP:1313" /translation="MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND QQRLIDQVEGALYEVKPDASIPDDDTELLRDYVKKLLKHPRQ" gene 400971..402386 /gene="phoA" /locus_tag="b0383" CDS 400971..402386 /gene="phoA" /locus_tag="b0383" /EC_number="3.1.3.1" /function="enzyme; Central intermediary metabolism: Phosphorus compounds" /note="start codon corrected; go_component: periplasmic space [goid 0042597]; go_process: phosphorus metabolism [goid 0006793]" /codon_start=1 /transl_table=11 /product="alkaline phosphatase" /protein_id="AAC73486.2" /db_xref="GI:48994877" /db_xref="ASAP:1328" /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKA AGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLL NARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKP LLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADH AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN VVGLTDQTDLFYTMKAALGLK" gene 402487..402825 /gene="psiF" /locus_tag="b0384" CDS 402487..402825 /gene="psiF" /locus_tag="b0384" /function="phenotype; Central intermediary metabolism: Phosphorus compounds" /note="EcoGene suggests alternate start codon; go_process: phosphorus metabolism [goid 0006793]; go_process: response to starvation [goid 0042594]" /codon_start=1 /transl_table=11 /product="induced by phosphate starvation" /protein_id="AAC73487.1" /db_xref="GI:1786583" /db_xref="ASAP:1330" /translation="MKRDGAMKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQ QATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNK FMSACLKKAA" gene 402927..404042 /gene="yaiC" /locus_tag="b0385" CDS 402927..404042 /gene="yaiC" /locus_tag="b0385" /function="orf; Unknown" /note="putative membrane protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73488.1" /db_xref="GI:1786584" /db_xref="ASAP:1336" /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL TGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVG VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA" gene complement(404059..404868) /gene="proC" /locus_tag="b0386" /note="synonyms: pro2, pro3" CDS complement(404059..404868) /gene="proC" /locus_tag="b0386" /EC_number="1.5.1.2" /function="enzyme; Amino acid biosynthesis: Proline" /note="pyrroline-5-carboxylate reductase, NAD(P)-binding; go_component: cytoplasm [goid 0005737]; go_process: proline biosynthesis [goid 0006561]" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase" /protein_id="AAC73489.1" /db_xref="GI:1786585" /db_xref="ASAP:1338" /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAA LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS" gene 404868..405446 /gene="yaiI" /locus_tag="b0387" CDS 404868..405446 /gene="yaiI" /locus_tag="b0387" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73490.1" /db_xref="GI:1786586" /db_xref="ASAP:1344" /translation="MPHSCREIHCFDNRWQKHKQNYAGRQKRDTIEDYPTKDDFMTIW VDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIV RQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGI QTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG" gene 405629..406153 /gene="aroL" /locus_tag="b0388" CDS 405629..406153 /gene="aroL" /locus_tag="b0388" /EC_number="2.7.1.71" /function="enzyme; Amino acid biosynthesis: Chorismate" /note="go_component: cytoplasm [goid 0005737]; go_process: chorismate biosynthesis [goid 0009423]" /codon_start=1 /transl_table=11 /product="shikimate kinase II" /protein_id="AAC73491.1" /db_xref="GI:1786587" /db_xref="ASAP:1353" /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT VAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCA PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV ISEIRSALAQTINC" gene 406203..406394 /gene="yaiA" /locus_tag="b0389" CDS 406203..406394 /gene="yaiA" /locus_tag="b0389" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73492.1" /db_xref="GI:1786588" /db_xref="ASAP:1355" /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH PTAQEAMDAKKRYEDPDKE" gene 406652..407329 /gene="aroM" /locus_tag="b0390" CDS 406652..407329 /gene="aroM" /locus_tag="b0390" /function="phenotype; Amino acid biosynthesis: Chorismate" /note="go_process: chorismate biosynthesis [goid 0009423]" /codon_start=1 /transl_table=11 /product="protein of aro operon, regulated by aroR" /protein_id="AAC73493.1" /db_xref="GI:1786589" /db_xref="ASAP:1357" /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR LAAELLV" gene 407401..407685 /gene="yaiE" /locus_tag="b0391" CDS 407401..407685 /gene="yaiE" /locus_tag="b0391" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73494.1" /db_xref="GI:1786590" /db_xref="ASAP:1360" /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL" gene 407893..408174 /gene="ykiA" /locus_tag="b0392" CDS 407893..408174 /gene="ykiA" /locus_tag="b0392" /function="orf; Unknown" /note="unknown CDS" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73495.1" /db_xref="GI:1786591" /db_xref="ASAP:1363" /translation="MLQSRNDHLRQTALRNAHTPALLLTTLTEPQDRSLAINNPQLAA DVKTAWLKEDPSLLLFVEQPDLSLLRDLVKTGATRKIRSEARHRLEEKQ" gene complement(408332..409243) /gene="yaiD" /locus_tag="b0393" /note="synonym: rdgC" CDS complement(408332..409243) /gene="yaiD" /locus_tag="b0393" /function="orf; Unknown" /note="putative exonuclease involved in removal of stalled replication fork; go_component: cytoplasm [goid 0005737]; go_process: DNA dependent DNA replication [goid 0006261]" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73496.1" /db_xref="GI:1786592" /db_xref="ASAP:1366" /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD ADFILMTGELAALIQNLIEGLGGEAQR" gene 409230..410276 /gene="yajF" /locus_tag="b0394" CDS 409230..410276 /gene="yajF" /locus_tag="b0394" /function="putative regulator; Not classified" /note="EcoGene suggests alternate start codon; putative kinase/transcriptional regulator (NagC/XylR (ROK) familiy); go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="possible NAGC-like transcriptional regulator" /protein_id="AAC73497.1" /db_xref="GI:1786593" /db_xref="ASAP:1372" /translation="MNHSMIISTALSLNLAGMITNCRRPCIANPVVRLYAIDIEKNKE STVRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQ RGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEA VDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYRE EVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYEL RLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGD SSGVRGAAWLWPQE" gene complement(410521..411705) /gene="araJ" /locus_tag="b0396" CDS complement(410521..411705) /gene="araJ" /locus_tag="b0396" /function="transport; Degradation of small molecules: Carbon compounds" /note="arabinose polymer transport protein (MFS family); go_component: inner membrane [goid 0019866]; go_process: carbohydrate catabolism [goid 0016052]" /codon_start=1 /transl_table=11 /product="involved in either transport or processing of arabinose polymers" /protein_id="AAC73499.1" /db_xref="GI:1786595" /db_xref="ASAP:1378" /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF LLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAW FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV LALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKP LG" gene complement(411831..414977) /gene="sbcC" /locus_tag="b0397" CDS complement(411831..414977) /gene="sbcC" /locus_tag="b0397" /function="enzyme; Degradation of DNA" /note="go_component: cytoplasm [goid 0005737]; go_process: DNA catabolism [goid 0006308]; go_process: DNA catabolism [goid 0006308]" /codon_start=1 /transl_table=11 /product="ATP-dependent dsDNA exonuclease" /protein_id="AAC73500.1" /db_xref="GI:1786597" /db_xref="ASAP:1381" /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQV QSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKA QPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA AKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL CGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE AQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN ELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQD VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQ LTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV KKINGLGYSKLESTFAVK" gene complement(414974..416176) /gene="sbcD" /locus_tag="b0398" CDS complement(414974..416176) /gene="sbcD" /locus_tag="b0398" /function="enzyme; Degradation of DNA" /note="go_component: cytoplasm [goid 0005737]; go_process: DNA catabolism [goid 0006308]; go_process: DNA catabolism [goid 0006308]" /codon_start=1 /transl_table=11 /product="ATP-dependent dsDNA exonuclease" /protein_id="AAC73501.1" /db_xref="GI:1786598" /db_xref="ASAP:1383" /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDY YQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH TLAGEHEA" gene 416366..417055 /gene="phoB" /locus_tag="b0399" /note="synonyms: phoRc, phoT" CDS 416366..417055 /gene="phoB" /locus_tag="b0399" /function="regulator; Global regulatory functions" /note="response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family); go_component: cytoplasm [goid 0005737]; go_function: transcriptional activator activity [goid 0016563]; go_process: phosphorus metabolism [goid 0006793]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="positive response regulator for pho regulon, sensor is PhoR (or CreC)" /protein_id="AAC73502.1" /db_xref="GI:1786599" /db_xref="ASAP:1389" /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEF KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV RGTGYRFSTRF" gene 417113..418408 /gene="phoR" /locus_tag="b0400" /note="synonyms: nmpB, phoR1, R1pho" CDS 417113..418408 /gene="phoR" /locus_tag="b0400" /EC_number="2.7.3.-" /EC_number="2.7.1.-" /function="enzyme; Global regulatory functions" /note="sensory histidine kinase in two-component regulatory system with PhoB, regulation of Pi uptake, senses Pi; go_component: inner membrane [goid 0019866]; go_process: phosphorus metabolism [goid 0006793]; go_process: protein modification [goid 0006464]" /codon_start=1 /transl_table=11 /product="positive and negative sensor protein for pho regulon" /protein_id="AAC73503.1" /db_xref="GI:1786600" /db_xref="ASAP:1391" /translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP LTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNE KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD" gene 418815..420134 /gene="brnQ" /locus_tag="b0401" /note="synonym: hrbA" CDS 418815..420134 /gene="brnQ" /locus_tag="b0401" /function="transport; Transport of small molecules: Amino acids, amines" /note="branched-chain amino acid transport system II (LIV-II) (LIVCS family); go_component: inner membrane [goid 0019866]; go_process: leucine biosynthesis [goid 0009098]; go_process: amino acid catabolism [goid 0009063]" /codon_start=1 /transl_table=11 /product="branched chain amino acid transport system II carrier protein" /protein_id="AAC73504.1" /db_xref="GI:1786601" /db_xref="ASAP:1394" /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFG GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH" gene 420210..421583 /gene="proY" /locus_tag="b0402" CDS 420210..421583 /gene="proY" /locus_tag="b0402" /function="transport; Transport of small molecules: Amino acids, amines" /note="proline transport protein (APC family); go_component: inner membrane [goid 0019866]; go_process: amino acid catabolism [goid 0009063]; go_process: arginine biosynthesis [goid 0006526]" /codon_start=1 /transl_table=11 /product="proline permease transport protein" /protein_id="AAC73505.1" /db_xref="GI:1786602" /db_xref="ASAP:1398" /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD RQLAENQ" gene 421739..423556 /gene="malZ" /locus_tag="b0403" CDS 421739..423556 /gene="malZ" /locus_tag="b0403" /EC_number="3.2.1.20" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="go_component: cytoplasm [goid 0005737]; go_process: carbohydrate catabolism [goid 0016052]; go_process: polysaccharide catabolism [goid 0000272]" /codon_start=1 /transl_table=11 /product="maltodextrin glucosidase" /protein_id="AAC73506.1" /db_xref="GI:1786604" /db_xref="ASAP:1402" /translation="MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDN EEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMP PARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILR DWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYR HVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPES PWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGW RLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAM NYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDT ARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQD TALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEV VLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN" gene complement(423561..424142) /gene="yajB" /locus_tag="b0404" CDS complement(423561..424142) /gene="yajB" /locus_tag="b0404" /function="orf; Not classified" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="putative glycoprotein" /protein_id="AAC73507.1" /db_xref="GI:1786605" /db_xref="ASAP:1404" /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM HRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFV CYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR DSWYDLDAHYDALETRFWQFYPRMMAQASRKAL" gene 424235..425305 /gene="queA" /locus_tag="b0405" CDS 424235..425305 /gene="queA" /locus_tag="b0405" /EC_number="5.-.-.-" /EC_number="2.4.2.29" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase; go_component: cytoplasm [goid 0005737]; go_process: RNA modification [goid 0009451]" /codon_start=1 /transl_table=11 /product="synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase" /protein_id="AAC73508.1" /db_xref="GI:1786606" /db_xref="ASAP:1411" /translation="MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK PGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDA DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF FSYGDAMFITYNPQAINERVGE" gene 425361..426488 /gene="tgt" /locus_tag="b0406" CDS 425361..426488 /gene="tgt" /locus_tag="b0406" /EC_number="2.4.2.29" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="go_component: cytoplasm [goid 0005737]; go_process: RNA modification [goid 0009451]" /codon_start=1 /transl_table=11 /product="tRNA-guanine transglycosylase" /protein_id="AAC73509.1" /db_xref="GI:1786607" /db_xref="ASAP:1413" /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD" gene 426511..426843 /gene="yajC" /locus_tag="b0407" CDS 426511..426843 /gene="yajC" /locus_tag="b0407" /function="orf; Unknown" /note="preprotein translocase, auxillary membrane component (General Secretory Pathway); go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73510.1" /db_xref="GI:1786608" /db_xref="ASAP:1415" /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL PKGTMKAL" gene 426871..428718 /gene="secD" /locus_tag="b0408" CDS 426871..428718 /gene="secD" /locus_tag="b0408" /function="transport; Protein, peptide secretion" /note="preprotein translocase, auxillary membrane component (General Secretory Pathway); go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="protein secretion; membrane protein, part of the channel" /protein_id="AAC73511.1" /db_xref="GI:1786609" /db_xref="ASAP:1417" /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI" gene 428729..429700 /gene="secF" /locus_tag="b0409" CDS 428729..429700 /gene="secF" /locus_tag="b0409" /function="transport; Protein, peptide secretion" /note="preprotein translocase, auxillary membrane component (General Secretory Pathway); go_component: inner membrane [goid 0019866]" /codon_start=1 /transl_table=11 /product="protein secretion, membrane protein" /protein_id="AAC73512.1" /db_xref="GI:1786610" /db_xref="ASAP:1419" /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP" gene 429829..430176 /gene="yajD" /locus_tag="b0410" CDS 429829..430176 /gene="yajD" /locus_tag="b0410" /function="orf; Unknown" /note="conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73513.1" /db_xref="GI:1786611" /db_xref="ASAP:1422" /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN PFADLKAMMNKKK" gene complement(430353..431237) /gene="tsx" /locus_tag="b0411" /note="synonyms: nupA, T6rec" CDS complement(430353..431237) /gene="tsx" /locus_tag="b0411" /function="transport; Transport of small molecules: Nucleosides, purines, pyrimidines" /note="go_component: external outer membrane (sensu Gram-negative Bacteria) [goid 0009279]; go_process: nucleobase, nucleoside and nucleotide interconversion [goid 0015949]" /codon_start=1 /transl_table=11 /product="nucleoside channel; receptor of phage T6 and colicin K" /protein_id="AAC73514.1" /db_xref="GI:1786612" /db_xref="ASAP:1425" /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI EPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMS LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN FNVRSTGWGGYLVVGYNF" gene complement(431536..432135) /gene="yajI" /locus_tag="b0412" CDS complement(431536..432135) /gene="yajI" /locus_tag="b0412" /function="orf; Unknown" /note="EcoGene suggests alternate start codon; conserved hypothetical protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical lipoprotein" /protein_id="AAC73515.1" /db_xref="GI:1786613" /db_xref="ASAP:1433" /translation="MLSLLLPSTIRLIATRKGRPMNTNVFRLLLLGSLFSLSACVQQS EVRQMKHSVSTLNQEMTQLNQETVKITQQNRLNAKSSSGVYLLPGAKTPARLESQIGT LRMSLVNITPDADGTTLTLRIQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLI NAPASVLAPSDVDIPLQLKGISVDQLGFVRIHDIQPVMQ" gene 432226..432675 /gene="ybaD" /locus_tag="b0413" CDS 432226..432675 /gene="ybaD" /locus_tag="b0413" /function="orf; Unknown" /note="conserved protein" /codon_start=1 /transl_table=11 /product="orf, hypothetical protein" /protein_id="AAC73516.1" /db_xref="GI:1786615" /db_xref="ASAP:1437" /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED" gene 432679..433782 /gene="ribD" /locus_tag="b0414" /note="synonym: ribG" CDS 432679..433782 /gene="ribD" /locus_tag="b0414" /EC_number="3.5.4.26" /EC_number="1.1.1.193" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /note="bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase" /codon_start=1 /transl_table=11 /product="diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase" /protein_id="AAC73517.1" /db_xref="GI:1786616" /db_xref="ASAP:1441" /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQD PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR TAMASGESQWITSPQARRDVQLLRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL YPQQNLRQPIRIVIDSQNRVTPVHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHK GHLDLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA" gene 433871..434341 /gene="ribE" /locus_tag="b0415" /note="synonym: ribH" CDS 433871..434341 /gene="ribE" /locus_tag="b0415" /EC_number="2.5.1.9" /function="enzyme; Biosynthesis of cofactors, carriers: Riboflavin" /codon_start=1 /transl_table=11 /product="riboflavin synthase, beta chain" /protein_id="AAC73518.1" /db_xref="GI:1786617" /db_xref="ASAP:1444" /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA" gene 434361..434780 /gene="nusB" /locus_tag="b0416" /note="synonyms: groNB, ssaD, ssyB" CDS 434361..434780 /gene="nusB" /locus_tag="b0416" /function="factor; RNA synthesis, modification, DNA transcription" /note="go_component: cytoplasm [goid 0005737]; go_process: transcription [goid 0006350]" /codon_start=1 /transl_table=11 /product="transcription termination; L factor" /protein_id="AAC73519.1" /db_xref="GI:1786618" /db_xref="ASAP:1447" /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK" gene 434858..435835 /gene="thiL" /locus_tag="b0417" /note="synonym: thiJ" CDS 434858..435835 /gene="thiL" /locus_tag="b0417" /EC_number="2.7.4.16" /function="enzyme; Biosynthesis of cofactors, carriers: Thiamin" /note="go_process: thiamin biosynthesis [goid 0009228]" /codon_start=1 /transl_table=11 /product="thiamin-monophosphate kinase" /protein_id="AAC73520.1" /db_xref="GI:1786619" /db_xref="AS