LOCUS AE014073 4599354 bp DNA circular BCT 22-APR-2003 DEFINITION Shigella flexneri 2a str. 2457T complete genome. ACCESSION AE014073 VERSION AE014073.1 KEYWORDS . SOURCE Shigella flexneri 2a str. 2457T ORGANISM Shigella flexneri 2a str. 2457T Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella. REFERENCE 1 (bases 1 to 4599354) AUTHORS Wei,J., Goldberg,M.B., Burland,V., Venkatesan,M.M., Deng,W., Fournier,G., Mayhew,G.F., Plunkett,G. III, Rose,D.J., Darling,A., Mau,B., Perna,N.T., Payne,S.M., Runyen-Janecky,L.J., Zhou,S., Schwartz,D.C. and Blattner,F.R. TITLE Complete Genome Sequence and Comparative Genomics of Shigella flexneri Serotype 2a Strain 2457T JOURNAL Infect. Immun. 71 (5), 2775-2786 (2003) PUBMED 12704152 REFERENCE 2 (bases 1 to 4599354) AUTHORS Wei,J., Goldberg,M.B., Burland,V., Venkatesan,M.M., Deng,W., Fournier,G., Mayhew,G.F., Plunkett,G. III, Rose,D.J., Darling,A., Mau,B., Perna,N.T., Payne,S.M., Runyen-Janecky,L.J., Zhou,S., Schwartz,D.C. and Blattner,F.R. TITLE Direct Submission JOURNAL Submitted (13-JUN-2002) Genetics Laboratory, University of Wisconsin - Madison, 445 Henry Mall, Madison, WI 53706, USA FEATURES Location/Qualifiers source 1..4599354 /organism="Shigella flexneri 2a str. 2457T" /strain="2457T" /serotype="2a" /db_xref="taxon:198215" gene 190..255 /gene="thrL" /note="locus_tag: S0001" CDS 190..255 /gene="thrL" /function="leader; Amino acid biosynthesis: Threonine" /note="residues 1 to 21 of 21 are 100 pct identical to residues 1 to 21 of 21 from Escherichia coli K-12 : B0001" /codon_start=1 /transl_table=11 /product="thr operon leader peptide" /protein_id="AAP15548.1" /db_xref="GI:30039814" /translation="MKRISTTITTTITITTGNGAG" gene 336..2798 /gene="thrA" /note="locus_tag: S0002" CDS 336..2798 /gene="thrA" /function="enzyme; Amino acid biosynthesis: Threonine" /note="residues 1 to 820 of 820 are 98.04 pct identical to residues 1 to 820 of 820 from Escherichia coli K-12 : B0002" /codon_start=1 /transl_table=11 /product="aspartokinase I, homoserine dehydrogenase I" /protein_id="AAP15549.1" /db_xref="GI:30039815" /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY LESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACL RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA LLTSVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD FLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLN AGDELVKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG KVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG NDVTAAGVFADLLRTLSWKLGV" gene 2800..3732 /gene="thrB" /note="locus_tag: S0003" CDS 2800..3732 /gene="thrB" /function="enzyme; Amino acid biosynthesis: Threonine" /note="residues 1 to 310 of 310 are 95.48 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 : B0003" /codon_start=1 /transl_table=11 /product="homoserine kinase" /protein_id="AAP15550.1" /db_xref="GI:30039816" /translation="MVKVYAPASSANMSVGFDVLGAAVAPVDGALLGDVVTVEAAETF SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTA QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN" gene 3733..5019 /gene="thrC" /note="locus_tag: S0004" CDS 3733..5019 /gene="thrC" /function="enzyme; Amino acid biosynthesis: Threonine" /note="residues 1 to 428 of 428 are 95.56 pct identical to residues 1 to 428 of 428 from Escherichia coli K-12 : B0004" /codon_start=1 /transl_table=11 /product="threonine synthase" /protein_id="AAP15551.1" /db_xref="GI:30039817" /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP TLAFKDFGGRFMAQMLTHIADDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR LLAQICYYFEAVAQLPQEARNQLVVSVPSGNFGDLTAGLLAKSFGLPVKRFIAATNVN DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE TLDLPKELAERADLPLLSHNLPADFSALRKLMMNHQ" gene 5242..5529 /gene="S0005" CDS 5242..5529 /gene="S0005" /note="residues 1 to 65 of 95 are 60.00 pct identical to residues 4 to 68 of 98 from Escherichia coli K-12 : B0005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15552.1" /db_xref="GI:30039818" /translation="MQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWD GGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR" repeat_region 5564..5668 /note="REP (repetitive extragenic palindromic) element, contains 2 REP sequences" gene complement(5682..6458) /gene="yaaA" /note="locus_tag: S0006" CDS complement(5682..6458) /gene="yaaA" /note="residues 1 to 258 of 258 are 100.00 pct identical to residues 1 to 258 of 258 from Escherichia coli K-12 : B0006" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15553.1" /db_xref="GI:30039819" /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF IIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR" gene complement(6528..7958) /gene="yaaJ" /note="locus_tag: S0007; point mutation" /pseudo gene 8237..9190 /gene="talB" /note="locus_tag: S0008" CDS 8237..9190 /gene="talB" /function="enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway" /note="residues 1 to 317 of 317 are 100.00 pct identical to residues 1 to 317 of 317 from Escherichia coli K-12 : B0008" /codon_start=1 /transl_table=11 /product="transaldolase B" /protein_id="AAP15554.1" /db_xref="GI:30039820" /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY ETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARI TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL" gene 9305..9892 /gene="mog" /note="locus_tag: S0009" CDS 9305..9892 /gene="mog" /function="transport; Biosynthesis of cofactors, carriers: molybdopterin" /note="residues 1 to 195 of 195 are 100.00 pct identical to residues 1 to 195 of 195 from Escherichia coli K-12 : B0009" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein" /protein_id="AAP15555.1" /db_xref="GI:30039821" /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELET RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFA SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE" gene complement(9927..10493) /gene="yaaH" /note="locus_tag: S0010" CDS complement(9927..10493) /gene="yaaH" /note="residues 1 to 188 of 188 are 92.02 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B0010" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15556.1" /db_xref="GI:30039822" /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF YGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC GASAIYLAMGEVLNEQFGRTVLPIGESH" gene complement(10642..11355) /gene="S0012" CDS complement(10642..11355) /gene="S0012" /function="putative enzyme; Not classified" /note="residues 1 to 237 of 237 are 82.27 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B0011" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="AAP15557.1" /db_xref="GI:30039823" /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSILM RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAVDARVNELEELLPLLMKDKL LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSTYRVT IPAVLQIACLRRMVSATQV" gene 10715..11314 /gene="htgA" /note="locus_tag: S0011" CDS 10715..11314 /gene="htgA" /function="regulator; Adaptations, atypical conditions" /note="residues 4 to 199 of 199 are 73.97 pct identical to residues 1 to 196 of 196 from Escherichia coli K-12 : B0012" /codon_start=1 /transl_table=11 /product="positive regulator for sigma 32 heat shock promoters" /protein_id="AAP15558.1" /db_xref="GI:30039824" /translation="MLPLTALTPFNAAPTGPPSPAPRSKPCPSTLIAAWVRKMRVSWL ESKCDTPFANNLSFISSGSSSSSSFTLASTACRNSCLCSSSIFFQVLRRNCSSNCCSI SNVDISLSAFSFNRFETSSKMARYNLPCPRSLLAILSPPKCCNSPAISCQLRRCCSGC PSIDLNSSLRISMLERRVLPFSLWVSNRAKFANCSSLQC" gene complement(11381..11785) /gene="yaaI" /note="locus_tag: S0013" CDS complement(11381..11785) /gene="yaaI" /note="residues 1 to 134 of 134 are 99.25 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B0013" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15559.1" /db_xref="GI:30039825" /translation="MKSVFTISASLAISLMLCCTAQANDHKLLGVIAMPRNETNDLAL KLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININS DNDNKRCVSKITFSGHTVNSSDMATLKIIGDD" gene 12162..14078 /gene="dnaK" /note="locus_tag: S0014" CDS 12162..14078 /gene="dnaK" /function="factor; Chaperones" /note="residues 1 to 601 of 638 are 97.83 pct identical to residues 1 to 601 of 638 from Escherichia coli K-12 : B0014" /codon_start=1 /transl_table=11 /product="chaperone Hsp70; autoregulated heat shock protein" /protein_id="AAP15560.1" /db_xref="GI:30039826" /translation="MGKIIGIDLGTTNSCVAIMDGTIPRVLENAEGDRTTPSIIAYTQ DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD DVVDAEFEEVKDKK" gene 14167..15297 /gene="dnaJ" /note="locus_tag: S0015" CDS 14167..15297 /gene="dnaJ" /function="factor; Chaperones" /note="residues 1 to 376 of 376 are 77.39 pct identical to residues 1 to 376 of 376 from Escherichia coli K-12 : B0015" /codon_start=1 /transl_table=11 /product="chaperone with DnaK; heat shock protein" /protein_id="AAP15561.1" /db_xref="GI:30039827" /translation="MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAE AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA GVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN EKQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR" gene complement(15401..15610) /gene="gef" /note="locus_tag: S0017" CDS complement(15401..15610) /gene="gef" /function="membrane; Cell killing" /note="residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 : B0018; regulated cell killing" /codon_start=1 /transl_table=11 /product="membrane toxin" /protein_id="AAP15562.1" /db_xref="GI:30039828" /translation="MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVT RKDLCEVHIRTGQTEVAVFTAYESE" gene 15602..15656 /gene="sokC" /note="locus_tag: S0016; regulates cell killing" misc_RNA 15602..15656 /gene="sokC" /product="antisense RNA" gene 16139..17305 /gene="nhaA" /note="locus_tag: S0018" CDS 16139..17305 /gene="nhaA" /function="transport; Transport of small molecules: Cations" /note="residues 1 to 388 of 388 are 81.95 pct identical to residues 1 to 388 of 388 from Escherichia coli K-12 : B0019; pH dependent" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter" /protein_id="AAP15563.1" /db_xref="GI:30039829" /translation="MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLET PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLVLKIFLMALA IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTA VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGIL CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV" gene 17371..18270 /gene="nhaR" /note="locus_tag: S0019" CDS 17371..18270 /gene="nhaR" /function="regulator; Transport of small molecules: Cations" /note="residues 1 to 299 of 299 are 100.00 pct identical to residues 3 to 301 of 301 from Escherichia coli K-12 : B0020" /codon_start=1 /transl_table=11 /product="transcriptional activator of nhaA" /protein_id="AAP15564.1" /db_xref="GI:30039830" /translation="MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEE RLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADA LSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGL FSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEI LGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERM IQHPAVQRICNTDYSALFSPAVR" repeat_region 18668..19435 /note="insertion element" /insertion_seq="IS1X1" gene complement(18683..19186) /gene="S0020" CDS complement(18683..19186) /gene="S0020" /function="IS, phage, Tn; Transposon-related functions" /note="residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]" /codon_start=1 /transl_table=11 /product="IS1 orfB" /protein_id="AAP15565.1" /db_xref="GI:30039831" /translation="MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ" gene complement(19105..19380) /gene="S0021" CDS complement(19105..19380) /gene="S0021" /function="IS, phage, Tn; Transposon-related functions" /note="residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]" /codon_start=1 /transl_table=11 /product="IS1 orfA" /protein_id="AAP15566.1" /db_xref="GI:30039832" /translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPDTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR" gene complement(19769..19954) /gene="rpsT" /note="locus_tag: S0022" CDS complement(19769..19954) /gene="rpsT" /function="structural component; ribosomal proteins - synthesis, modification" /note="residues 1 to 61 of 61 are 100.00 pct identical to residues 27 to 87 of 87 from Escherichia coli K-12 : B0023" /codon_start=1 /transl_table=11 /product="30S ribosomal subunit protein S20" /protein_id="AAP15567.1" /db_xref="GI:30039833" /translation="MMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKN KAARHKANLTAQINKLA" gene 20135..20353 /gene="S0023" CDS 20135..20353 /gene="S0023" /note="residues 1 to 72 of 72 are 98.61 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B0024" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15568.1" /db_xref="GI:30039834" /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGQFLPVICSMAMK SHFFLISVLNRRLTLTAVQGILGRFSLF" gene 20361..21302 /gene="ribF" /note="locus_tag: S0024" CDS 20361..21302 /gene="ribF" /function="putative regulator; Not classified" /note="residues 1 to 313 of 313 are 100.00 pct identical to residues 1 to 313 of 313 from Escherichia coli K-12 : B0025" /codon_start=1 /transl_table=11 /product="putative regulator" /protein_id="AAP15569.1" /db_xref="GI:30039835" /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV SPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA" gene 21345..24161 /gene="ileS" /note="locus_tag: S0025" CDS 21345..24161 /gene="ileS" /function="enzyme; Aminoacyl tRNA synthetases, tRNA modification" /note="residues 1 to 938 of 938 are 99.57 pct identical to residues 1 to 938 of 938 from Escherichia coli K-12 : B0026" /codon_start=1 /transl_table=11 /product="isoleucine tRNA synthetase" /protein_id="AAP15570.1" /db_xref="GI:30039836" /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD QDALKAKFGVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWLPDWGQA RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGECEKYVFTGEWYEGLFGL ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALG DELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV AEHAEICGRCVSNVAGDGEKRKFA" gene 24161..24655 /gene="lspA" /note="locus_tag: S0026" CDS 24161..24655 /gene="lspA" /function="enzyme; Protein, peptide secretion" /note="residues 1 to 164 of 164 are 92.07 pct identical to residues 1 to 164 of 164 from Escherichia coli K-12 : B0027" /codon_start=1 /transl_table=11 /product="prolipoprotein signal peptidase (SPase II)" /protein_id="AAP15571.1" /db_xref="GI:30039837" /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVLLAVMMYRSKATQKLNNIAYA LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSK AKKQ" gene 24742..25191 /gene="slpA" /note="locus_tag: S0027" CDS 24742..25191 /gene="slpA" /function="putative enzyme; Proteins - translation and modification" /note="residues 1 to 149 of 149 are 100.00 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B0028" /codon_start=1 /transl_table=11 /product="probable FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase)" /protein_id="AAP15572.1" /db_xref="GI:30039838" /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA" gene 25193..26143 /gene="lytB" /note="locus_tag: S0028" CDS 25193..26143 /gene="lytB" /function="regulator; Global regulatory functions" /note="residues 1 to 316 of 316 are 93.98 pct identical to residues 1 to 316 of 316 from Escherichia coli K-12 : B0029; involved in control of stringent response and penicillin tolerance" /codon_start=1 /transl_table=11 /product="LytB protein" /protein_id="AAP15573.1" /db_xref="GI:30039839" /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL VVGSKNSSNSNRLAELAQRMGKHAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD" gene 26209..27123 /gene="yaaF" /note="locus_tag: S0029" CDS 26209..27123 /gene="yaaF" /note="residues 1 to 302 of 304 are 94.37 pct identical to residues 1 to 302 of 304 from Escherichia coli K-12 : B0030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15574.1" /db_xref="GI:30039840" /translation="MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP AFLAIRDALMRAPEPVTLVAIGPLTNIALLLLQCPECKPYIRRLVIMGGSAGRGNCTP NAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALF SHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLG KPANVQVALDLNVKGFQQWVAEVLALVP" gene 27290..28111 /gene="dapB" /note="locus_tag: S0030" CDS 27290..28111 /gene="dapB" /function="enzyme; Amino acid biosynthesis: Lysine" /note="residues 1 to 273 of 273 are 94.13 pct identical to residues 1 to 273 of 273 from Escherichia coli K-12 : B0031" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate reductase" /protein_id="AAP15575.1" /db_xref="GI:30039841" /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL LGSDAGELAGAGKTGVTVQSSLDAIKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVG EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL" gene 28567..29715 /gene="carA" /note="locus_tag: S0031" CDS 28567..29715 /gene="carA" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /note="residues 1 to 382 of 382 are 99.47 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 : B0032" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthetase, glutamine (small) subunit" /protein_id="AAP15576.1" /db_xref="GI:30039842" /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD GTLQGIHRIDKPAFSFQGHPEASPGPHDAAPLFDHFIKLIEQYRKTAK" gene 29733..32954 /gene="carB" /note="locus_tag: S0032" CDS 29733..32954 /gene="carB" /function="enzyme; Pyrimidine ribonucleotide biosynthesis" /note="residues 1 to 1073 of 1073 are 99.72 pct identical to residues 1 to 1073 of 1073 from Escherichia coli K-12 : B0033" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase large subunit" /protein_id="AAP15577.1" /db_xref="GI:30039843" /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGV REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV DRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK" gene 33111..33611 /gene="caiF" /note="locus_tag: S0033" CDS 33111..33611 /gene="caiF" /function="regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="residues 1 to 166 of 166 are 100.00 pct identical to residues 1 to 166 of 166 from Escherichia coli K-12 : B0034" /codon_start=1 /transl_table=11 /product="transcriptional regulator of cai operon" /protein_id="AAP15578.1" /db_xref="GI:30039844" /translation="MKLHTIDISTILIWPCLIASKRVIARLLICETGVRMCEGYVEKP LYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLE GRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMML SKSMRR" gene complement(33697..34308) /gene="caiE" /note="locus_tag: S0034" CDS complement(33697..34308) /gene="caiE" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="residues 1 to 203 of 203 are 98.02 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 : B0035; involved in possible synthesis of cofactor for carnitine racemase and dehydratase" /codon_start=1 /transl_table=11 /product="carnitine operon protein CaiE" /protein_id="AAP15579.1" /db_xref="GI:30039845" /translation="MERTLTTVSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYI GPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDA LVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKR LNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR" gene complement(34293..35186) /gene="caiD" /note="locus_tag: S0035" CDS complement(34293..35186) /gene="caiD" /function="enzyme; Degradation of small molecules: Amines" /note="residues 1 to 297 of 297 are 94.27 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B0036" /codon_start=1 /transl_table=11 /product="carnitine racemase" /protein_id="AAP15580.1" /db_xref="GI:30039846" /translation="MKRQGTTLPANNHALKQYAFFAGMLSSLKKQKWRKGMSESLHLT RNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDL KAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADN ASFALPEAKLGIVPDSGGVLRLPKILPPTIVNEMVMTGRRMGAEEALRWGIVNRVVSQ AELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHS EDAIEGPLAFAEKRDPVWKGR" gene complement(35187..36755) /gene="caiC" /note="locus_tag: S0036" CDS complement(35187..36755) /gene="caiC" /function="putative enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="residues 1 to 522 of 522 are 95.59 pct identical to residues 1 to 522 of 522 from Escherichia coli K-12 : B0037" /codon_start=1 /transl_table=11 /product="probable crotonobetaine/carnitine-CoA ligase" /protein_id="AAP15581.1" /db_xref="GI:30039847" /translation="MDRGAMDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYS YLELNQEINRTANLFYTLGIRKGNKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL REESEWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQ LKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRD DDVYMTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQAQKYRATITECIPM MIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGII GDRPSDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNP KATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPK IQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDL PRNCSGKIIRKNLK" gene complement(36814..38031) /gene="caiB" /note="locus_tag: S0037" CDS complement(36814..38031) /gene="caiB" /function="enzyme; Central intermediary metabolism: Pool, multipurpose conversions" /note="residues 1 to 405 of 405 are 97.03 pct identical to residues 1 to 405 of 405 from Escherichia coli K-12 : B0038" /codon_start=1 /transl_table=11 /product="l-carnitine dehydratase" /protein_id="AAP15582.1" /db_xref="GI:30039848" /translation="MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIE NVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFA RRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP MPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNG GEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPE GTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQY VARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDI QELVSKGLAKVED" repeat_region 38067..38148 /note="REP (repetitive extragenic palindromic) element, contains 2 REP sequences" gene complement(38160..39302) /gene="caiA" /note="locus_tag: S0038" CDS complement(38160..39302) /gene="caiA" /function="putative regulator; Central intermediary metabolism: Pool, multipurpose conversions" /note="residues 1 to 380 of 380 are 100.00 pct identical to residues 1 to 380 of 380 from Escherichia coli K-12 : B0039" /codon_start=1 /transl_table=11 /product="probable carnitine operon oxidoreductase" /protein_id="AAP15583.1" /db_xref="GI:30039849" /translation="MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVK ALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGT QEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSA YTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELD EKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRF QLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQ VLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR" gene complement(39333..40847) /gene="caiT" /note="locus_tag: S0039" CDS complement(39333..40847) /gene="caiT" /function="putative transport; Central intermediary metabolism: Pool, multipurpose conversions" /note="residues 1 to 504 of 504 are 95.43 pct identical to residues 1 to 504 of 504 from Escherichia coli K-12 : B0040" /codon_start=1 /transl_table=11 /product="probable carnitine transporter" /protein_id="AAP15584.1" /db_xref="GI:30039850" /translation="MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVF SYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSA AVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYF FFVRKMEVIRPSSTLVPLAGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTEC MQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIV SGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIF LARISRGRTVRELCFGMVMGLTASTWILWTVLGSNTLLLMDKNIINIPNLIEQYGVAR AIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRI GWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD" gene 41167..41973 /gene="fixA" /note="locus_tag: S0040" CDS 41167..41973 /gene="fixA" /function="putative enzyme; Energy metabolism, carbon: Electron transport" /note="residues 1 to 268 of 268 are 92.53 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B0041; involved in carnitine metabolism" /codon_start=1 /transl_table=11 /product="probable flavoprotein subunit" /protein_id="AAP15585.1" /db_xref="GI:30039851" /translation="MNDVSFMISGDAMKIITCYKCVPDEQDIAVNNADGSLDFSKADA KISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDD QFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVW SAADIGFNAVDAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI" gene 41988..42929 /gene="fixB" /note="locus_tag: S0041; point mutation" /pseudo gene 42980..44266 /gene="fixC" /note="locus_tag: S0042" CDS 42980..44266 /gene="fixC" /function="putative carrier; Energy metabolism, carbon: Electron transport" /note="residues 1 to 428 of 428 are 95.32 pct identical to residues 1 to 428 of 428 from Escherichia coli K-12 : B0043; involved in electron transport" /codon_start=1 /transl_table=11 /product="flavoprotein" /protein_id="AAP15586.1" /db_xref="GI:30039852" /translation="MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKN VTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRS YSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVLLAD GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD GLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEY SAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSA MKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGNPELAVGVARDLFT IDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL" gene 44263..44550 /gene="fixX" /note="locus_tag: S0043" CDS 44263..44550 /gene="fixX" /function="putative carrier; Not classified" /note="residues 1 to 95 of 95 are 98.94 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 : B0044" /codon_start=1 /transl_table=11 /product="putative ferredoxin" /protein_id="AAP15587.1" /db_xref="GI:30039853" /translation="MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQVLELLVKACP AGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG" gene 44609..46003 /gene="yaaU" /note="locus_tag: S0044" CDS 44609..46003 /gene="yaaU" /function="putative transport; Not classified" /note="residues 1 to 443 of 464 are 97.06 pct identical to residues 1 to 443 of 443 from Escherichia coli K-12 : B0045" /codon_start=1 /transl_table=11 /product="putative transport protein" /protein_id="AAP15588.1" /db_xref="GI:30039854" /translation="MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQL TPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMC VSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADL VGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFG EPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGSLGLG VGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGI WLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPI FINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMGLFVQISL FSESILLTISRVNI" gene 46051..46581 /gene="yabF" /note="locus_tag: S0045" CDS 46051..46581 /gene="yabF" /function="putative enzyme; Not classified" /note="residues 1 to 176 of 176 are 99.43 pct identical to residues 1 to 176 of 176 from Escherichia coli K-12 : B0046" /codon_start=1 /transl_table=11 /product="putative NAD(P)H oxidoreductase" /protein_id="AAP15589.1" /db_xref="GI:30039855" /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVLSHGWAYGHGGTALHGKHLLW AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA RHYKQRLLEWQEAHHG" gene 46574..48436 /gene="kefC" /note="locus_tag: S0046" CDS 46574..48436 /gene="kefC" /function="transport; Transport of small molecules: Cations" /note="residues 1 to 620 of 620 are 87.25 pct identical to residues 1 to 620 of 620 from Escherichia coli K-12 : B0047" /codon_start=1 /transl_table=11 /product="K+ efflux antiporter" /protein_id="AAP15590.1" /db_xref="GI:30039856" /translation="MDSHTLVQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLG LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI PLVAMIPLLAASSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF FIGVGMSIDFGTLIENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS" gene 48627..49106 /gene="folA" /note="locus_tag: S0047" CDS 48627..49106 /gene="folA" /function="enzyme; Biosynthesis of cofactors, carriers: Folic acid" /note="residues 1 to 159 of 159 are 100.00 pct identical to residues 1 to 159 of 159 from Escherichia coli K-12 : B0048" /codon_start=1 /transl_table=11 /product="dihydrofolate reductase type I" /protein_id="AAP15591.1" /db_xref="GI:30039857" /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR" repeat_region 49131..49167 /note="REP (repetitive extragenic palindromic) element, contains 1 REP sequence" gene complement(49184..50026) /gene="apaH" /note="locus_tag: S0048" CDS complement(49184..50026) /gene="apaH" /function="enzyme; Salvage of nucleosides and nucleotides" /note="residues 1 to 280 of 280 are 99.64 pct identical to residues 1 to 280 of 280 from Escherichia coli K-12 : B0049" /codon_start=1 /transl_table=11 /product="diadenosine tetraphosphatase" /protein_id="AAP15592.1" /db_xref="GI:30039858" /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGSLTCLRWEDKQYFVQPSNRHKDLGE AAAS" gene complement(50033..50410) /gene="apaG" /note="locus_tag: S0049" CDS complement(50033..50410) /gene="apaG" /note="residues 1 to 125 of 125 are 91.20 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B0050" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15593.1" /db_xref="GI:30039859" /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI DENGVPFSIDIPVFRLAVPTLIH" gene complement(50413..51234) /gene="ksgA" /note="locus_tag: S0050" CDS complement(50413..51234) /gene="ksgA" /function="enzyme; Drug/analog sensitivity" /note="residues 1 to 273 of 273 are 99.63 pct identical to residues 1 to 273 of 273 from Escherichia coli K-12 : B0051" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase" /protein_id="AAP15594.1" /db_xref="GI:30039860" /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDIRVLSRITTEAF NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES" gene complement(51231..52220) /gene="pdxA" /note="locus_tag: S0051" CDS complement(51231..52220) /gene="pdxA" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridoxine" /note="residues 1 to 329 of 329 are 95.44 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 : B0052" /codon_start=1 /transl_table=11 /product="pyridoxal phosphate biosynthetic protein PdxA" /protein_id="AAP15595.1" /db_xref="GI:30039861" /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT DRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLA RACDGCLNGEFAALITGPVHKGVINDASIPFTGHTEFFEERSQAKKVVMMLATEELRV ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM GTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ GFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ" gene complement(52220..53506) /gene="surA" /note="locus_tag: S0052" CDS complement(52220..53506) /gene="surA" /function="phenotype; Not classified" /note="residues 1 to 428 of 428 are 100.00 pct identical to residues 1 to 428 of 428 from Escherichia coli K-12 : B0053" /codon_start=1 /transl_table=11 /product="survival protein" /protein_id="AAP15596.1" /db_xref="GI:30039862" /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN" gene complement(53559..55913) /gene="imp" /note="locus_tag: S0053" CDS complement(53559..55913) /gene="imp" /function="phenotype; Adaptations, atypical conditions" /note="residues 1 to 784 of 784 are 99.61 pct identical to residues 1 to 784 of 784 from Escherichia coli K-12 : B0054" /codon_start=1 /transl_table=11 /product="organic solvent tolerance protein" /protein_id="AAP15597.1" /db_xref="GI:30039863" /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKV SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE AKFLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI YDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYHYASPEYIQATLPKYYSTAEQYKNGI SQVGAVASRPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL" gene 56168..56983 /gene="yabH" /note="locus_tag: S0054" CDS 56168..56983 /gene="yabH" /function="phenotype; Not classified" /note="residues 1 to 271 of 271 are 85.23 pct identical to residues 1 to 271 of 271 from Escherichia coli K-12 : B0055" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="AAP15598.1" /db_xref="GI:30039864" /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE LGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDA TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK" repeat_region 56994..57079 /note="REP (repetitive extragenic palindromic) element, contains 2 REP sequences" gene complement(57100..57759) /gene="yabO" /note="locus_tag: S0055" CDS complement(57100..57759) /gene="yabO" /note="residues 1 to 219 of 219 are 100.00 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B0058" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15599.1" /db_xref="GI:30039865" /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD F" gene complement(57771..60677) /gene="hepA" /note="locus_tag: S0056" CDS complement(57771..60677) /gene="hepA" /function="putative enzyme; RNA synthesis, modification, DNA transcription" /note="residues 1 to 968 of 968 are 99.79 pct identical to residues 1 to 968 of 968 from Escherichia coli K-12 : B0059" /codon_start=1 /transl_table=11 /product="probable ATP-dependent RNA helicase" /protein_id="AAP15600.1" /db_xref="GI:30039866" /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV ICAKAATALQLEQVLREREGILAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKSCREQHEALKAQLE QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ" gene complement(60842..63193) /gene="polB" /note="locus_tag: S0057" CDS complement(60842..63193) /gene="polB" /function="enzyme; DNA - replication, repair, restriction/modification" /note="residues 1 to 783 of 783 are 99.23 pct identical to residues 1 to 783 of 783 from Escherichia coli K-12 : B0060" /codon_start=1 /transl_table=11 /product="DNA polymerase II" /protein_id="AAP15601.1" /db_xref="GI:30039867" /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF IHADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT RHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPD VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS TEGFLDAWFSREKHCLPEIVTNIWHGRDKAKRQGNKPLSQALKIIMNAFYGVLGTTAC RFFDPRLASSITMRGHQIMRQTKALIEAQGYDIIYGDTDSTFVWLKGAHSEEEAAKIG RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRQTIDKLMAGELDARL VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF" gene complement(63268..63963) /gene="araD" /note="locus_tag: S0058" CDS complement(63268..63963) /gene="araD" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="residues 1 to 231 of 231 are 99.56 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B0061" /codon_start=1 /transl_table=11 /product="L-ribulose-5-phosphate 4-epimerase" /protein_id="AAP15602.1" /db_xref="GI:30039868" /translation="MLKDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT IWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKH YLRKHGAKAYYGQ" repeat_region 63974..64140 /note="REP (repetitive extragenic palindromic) element, contains 3 REP sequences" gene complement(64163..65665) /gene="araA" /note="locus_tag: S0059" CDS complement(64163..65665) /gene="araA" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="residues 1 to 500 of 500 are 98.79 pct identical to residues 1 to 500 of 500 from Escherichia coli K-12 : B0062" /codon_start=1 /transl_table=11 /product="L-arabinose isomerase" /protein_id="AAP15603.1" /db_xref="GI:30039869" /translation="MAIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL PYKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGYLVQVV NSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFT TTFEDLHGLKQLPGLPVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED YTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI VASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHH TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR" gene complement(65676..67376) /gene="araB" /note="locus_tag: S0060" CDS complement(65676..67376) /gene="araB" /function="enzyme; Degradation of small molecules: Carbon compounds" /note="residues 1 to 566 of 566 are 94.69 pct identical to residues 1 to 566 of 566 from Escherichia coli K-12 : B0063" /codon_start=1 /transl_table=11 /product="L-ribulokinase" /protein_id="AAP15604.1" /db_xref="GI:30039870" /translation="MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCD APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG QSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLP VVLDWFNGRRTPNANQRLKGVITDLNLATDTPLLFGGLIAATAFGARAIMECFTDQGI AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP SAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL " gene 67715..68593 /gene="araC" /note="locus_tag: S0061" CDS 67715..68593 /gene="araC" /function="regulator; Degradation of small molecules: Carbon compounds" /note="residues 1 to 292 of 292 are 93.49 pct identical to residues 1 to 292 of 292 from Escherichia coli K-12 : B0064" /codon_start=1 /transl_table=11 /product="transcriptional regulator for ara operon" /protein_id="AAP15605.1" /db_xref="GI:30039871" /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGCHPEAREWYHQWVYFRPRA YWHEWLNWPSIFANTGFFRPDEAHQPYFSDLFGQIINAGQGEGRYSELLAMNLLEQLL LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF RAGCEEKVNDVAVKLS" gene 68679..69443 /gene="yabI" /note="locus_tag: S0062" CDS 68679..69443 /gene="yabI" /note="residues 1 to 254 of 254 are 99.21 pct identical to residues 1 to 254 of 254 from Escherichia coli K-12 : B0065" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15606.1" /db_xref="GI:30039872" /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG LGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV" repeat_region 69464..69548 /note="REP (repetitive extragenic palindromic) element, contains 2 REP sequences" gene complement(69557..70255) /gene="yabJ" /note="locus_tag: S0063" CDS complement(69557..70255) /gene="yabJ" /function="putative transport; Not classified" /note="residues 1 to 232 of 232 are 97.41 pct identical to residues 1 to 232 of 232 from Escherichia coli K-12 : B0066" /codon_start=1 /transl_table=11 /product="putative ATP-binding component of a transport system" /protein_id="AAP15607.1" /db_xref="GI:30039873" /translation="MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL IAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL NAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEELL SGKASASAILGITG" gene complement(70239..71849) /gene="yabK" /note="locus_tag: S0064" CDS complement(70239..71849) /gene="yabK" /function="putative transport; Not classified" /note="residues 1 to 536 of 536 are 88.61 pct identical to residues 1 to 536 of 536 from Escherichia coli K-12 : B0067" /codon_start=1 /transl_table=11 /product="putative transport system permease protein" /protein_id="AAP15608.1" /db_xref="GI:30039874" /translation="MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWV AVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL PVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ ALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG GGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQ GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFL LLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA VTALILLLLCFLLFTVIEKLPGRNVKTD" gene complement(71825..72808) /gene="tbpA" /note="locus_tag: S0065" CDS complement(71825..72808) /gene="tbpA" /function="putative transport; Transport of small molecules: Other" /note="residues 13 to 327 of 327 are 93.96 pct identical to residues 13 to 327 of 327 from Escherichia coli K-12 : B0068" /codon_start=1 /transl_table=11 /product="thiamin-binding periplasmic protein" /protein_id="AAP15609.1" /db_xref="GI:30039875" /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAF EANCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP TGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR" gene complement(72972..74627) /gene="yabN" /note="locus_tag: S0066" CDS complement(72972..74627) /gene="yabN" /function="putative transport; Not classified" /note="residues 1 to 551 of 551 are 98.54 pct identical to residues 1 to 551 of 551 from Escherichia coli K-12 : B0069" /codon_start=1 /transl_table=11 /product="putative transport protein" /protein_id="AAP15610.1" /db_xref="GI:30039876" /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEE NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIT DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPCEWETLSNFASHPIGTGPYAVIRN STNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEKKEIESRLEEG CYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIES DIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA SKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP" gene 74949..76127 /gene="yabM" /note="locus_tag: S0067" CDS 74949..76127 /gene="yabM" /function="putative transport; Not classified" /note="residues 1 to 392 of 392 are 97.95 pct identical to residues 1 to 392 of 392 from Escherichia coli K-12 : B0070" /codon_start=1 /transl_table=11 /product="putative transport protein" /protein_id="AAP15611.1" /db_xref="GI:30039877" /translation="MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREV GAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRH YLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPL AFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLLSVARVELPSENALSMQGDWQDSNVR MLFVASTLMWTCNTMYIIDMPLWISSDLGLPDKLAGFLMGTAAGLEIPAMILAGYYVK RYGKRRMMVIAVVAGVLFYTGLIFFHSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMP GRAGAATTLFTNTISTGVILAGVIQGAIAQSWGHFAVYWVIAIISVVALFLTAKVKDV " gene complement(76176..76781) /gene="leuD" /note="locus_tag: S0068" CDS complement(76176..76781) /gene="leuD" /function="enzyme; Amino acid biosynthesis: Leucine" /note="residues 1 to 201 of 201 are 99.50 pct identical to residues 1 to 201 of 201 from Escherichia coli K-12 : B0071" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase subunit" /protein_id="AAP15612.1" /db_xref="GI:30039878" /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY RFTIDAFRRHCMMNGLDSIGLTLQHDDAIASYEAKQPAFMN" repeat_region 76197..76233 /note="REP (repetitive extragenic palindromic) element, contains 1 REP sequence" gene complement(76792..78192) /gene="leuC" /note="locus_tag: S0069" CDS complement(76792..78192) /gene="leuC" /function="enzyme; Amino acid biosynthesis: Leucine" /note="residues 1 to 466 of 466 are 98.28 pct identical to residues 1 to 466 of 466 from Escherichia coli K-12 : B0072" /codon_start=1 /transl_table=11 /product="3-isopropylmalate isomerase (dehydratase) subunit" /protein_id="AAP15613.1" /db_xref="GI:30039879" /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT LCNMAIEMGAKAALVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLD KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA AAAAVTGHFADIRNIK" gene complement(78195..79289) /gene="leuB" /note="locus_tag: S0070" CDS complement(78195..79289) /gene="leuB" /function="enzyme; Amino acid biosynthesis: Leucine" /note="residues 1 to 364 of 364 are 92.85 pct identical to residues 1 to 364 of 364 from Escherichia coli K-12 : B0073" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="AAP15614.1" /db_xref="GI:30039880" /translation="MMSKNYHIAVLPGDGIGPEVMTQALKVLNAVRNRFAMRITTSHY DVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKH FKLFSNLRPAKLYQGLEAFCPLRADIAANGFDIQCVRELTGGIYFGQPKGREGSGQYE KAFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYP DVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQ GFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG IRTGDLARGAAAVSTDEMGDIIARYVAEGV" gene complement(79286..80857) /gene="leuA" /note="locus_tag: S0071" CDS complement(79286..80857) /gene="leuA" /function="enzyme; Amino acid biosynthesis: Leucine" /note="residues 1 to 523 of 523 are 97.13 pct identical to residues 1 to 523 of 523 from Escherichia coli K-12 : B0074" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="AAP15615.1" /db_xref="GI:30039881" /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITDYNVELVKYS LTAKGHGKDALGQVDIVTNYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE LQRKTQHNENNKETV" gene complement(80950..81036) /gene="leuL" /note="locus_tag: S0072" CDS complement(80950..81036) /gene="leuL" /function="leader; Amino acid biosynthesis: Leucine" /note="residues 1 to 28 of 28 are 100.00 pct identical to residues 1 to 28 of 28 from Escherichia coli K-12 : B0075" /codon_start=1 /transl_table=11 /product="leu operon leader peptide" /protein_id="AAP15616.1" /db_xref="GI:30039882" /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH" gene 81518..82639 /gene="leuO" /note="locus_tag: S0073" CDS 81518..82639 /gene="leuO" /function="putative regulator; Amino acid biosynthesis: Leucine" /note="residues 1 to 373 of 373 are 95.44 pct identical to residues 1 to 373 of 373 from Escherichia coli K-12 : B0076" /codon_start=1 /transl_table=11 /product="probable transcriptional activator for leuABCD operon" /protein_id="AAP15617.1" /db_xref="GI:30039883" /translation="MTHSTAMDSVFIRTRIFMFSEFYSFCFFLFYMHDKSYSSGLFLC IPIRERELSVTVELSMPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAA HVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELP GSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRY QETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLD RFASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQV LPLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR" gene 82873..84681 /gene="ilvI" /note="locus_tag: S0074" CDS 82873..84681 /gene="ilvI" /function="enzyme; Amino acid biosynthesis: Isoleucine, Valine" /note="residues 1 to 602 of 602 are 95.01 pct identical to residues 3 to 604 of 604 from Escherichia coli K-12 : B0077" /codon_start=1 /transl_table=11 /product="acetolactate synthase III, large subunit" /protein_id="AAP15618.1" /db_xref="GI:30039884" /translation="MSLAANCLSKIGRLMCFTHFFRQTVRQAMEMLSGAEMVVRSLID QGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADGLARATGEVGVVLVT SGPGATNAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVGISRPVVKHSFLV KQTEDIPQVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYVCPESVSMRSYNPTTT GHKGQIKRALQTLVAAKKPVVYVGGGAIMAGCHQQLKETVEALNLPVVSSLMGMGAFP ATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATVLHIDID PTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRALQCLK YDTHSEKIKPQAVIETLWRLTNGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGLGT MGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGM VKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNN RLVFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT" gene 84684..85175 /gene="ilvH" /note="locus_tag: S0075" CDS 84684..85175 /gene="ilvH" /function="enzyme; Amino acid biosynthesis: Isoleucine, Valine" /note="residues 1 to 163 of 163 are 99.38 pct identical to residues 1 to 163 of 163 from Escherichia coli K-12 : B0078" /codon_start=1 /transl_table=11 /product="acetolactate synthase III, small subunit" /protein_id="AAP15619.1" /db_xref="GI:30039885" /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK RNTEIFRGQIIDVTPSLYTVQLAGTSDKLDAFLASIRDVAKIVEVARSGVVGLSRGDK IMR" gene 85188..85274 /gene="fruL" /note="locus_tag: S0076" CDS 85188..85274 /gene="fruL" /function="leader; Energy metabolism, carbon: Glycolysis" /note="residues 1 to 28 of 28 are 100.00 pct identical to residues 1 to 28 of 28 from Escherichia coli K-12 : B0079" /codon_start=1 /transl_table=11 /product="fruR leader peptide" /protein_id="AAP15620.1" /db_xref="GI:30039886" /translation="MRNLQPNMSRWAFFAKSVGTWNKSSCRS" gene 85356..86360 /gene="fruR" /note="locus_tag: S0077" CDS 85356..86360 /gene="fruR" /function="regulator; Energy metabolism, carbon: Glycolysis" /note="residues 1 to 334 of 334 are 100.00 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 : B0080" /codon_start=1 /transl_table=11 /product="transcriptional repressor of fru operon and others" /protein_id="AAP15621.1" /db_xref="GI:30039887" /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVV GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS " repeat_region 86428..87195 /note="insertion element" /insertion_seq="IS1X1" gene 86483..86758 /gene="S0078" CDS 86483..86758 /gene="S0078" /function="IS, phage, Tn; Transposon-related functions" /note="residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]" /codon_start=1 /transl_table=11 /product="IS1 orfA" /protein_id="AAP15622.1" /db_xref="GI:30039888" /translation="MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFT YTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR" gene 86677..87180 /gene="S0079" CDS 86677..87180 /gene="S0079" /function="IS, phage, Tn; Transposon-related functions" /note="residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]" /codon_start=1 /transl_table=11 /product="IS1 orfB" /protein_id="AAP15623.1" /db_xref="GI:30039889" /translation="MSCQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMD EHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHDKVIGHY LNIKHYQ" gene 87739..88197 /gene="yabB" /note="locus_tag: S0080" CDS 87739..88197 /gene="yabB" /note="residues 1 to 152 of 152 are 98.68 pct identical to residues 1 to 152 of 152 from Escherichia coli K-12 : B0081" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15624.1" /db_xref="GI:30039890" /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPC LLLYPLPEWEIIEQKLSRLLSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL" gene 88199..89140 /gene="yabC" /note="locus_tag: S0081" CDS 88199..89140 /gene="yabC" /note="residues 1 to 313 of 313 are 95.20 pct identical to residues 1 to 313 of 313 from Escherichia coli K-12 : B0082" /codon_start=1 /transl_table=11 /product="putative apolipoprotein" /protein_id="AAP15625.1" /db_xref="GI:30039891" /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEEHF AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA" gene 89137..89502 /gene="ftsL" /note="locus_tag: S0082" CDS 89137..89502 /gene="ftsL" /function="phenotype; Cell division" /note="residues 1 to 121 of 121 are 85.12 pct identical to residues 1 to 121 of 121 from Escherichia coli K-12 : B0083" /codon_start=1 /transl_table=11 /product="cell division protein; in growth of wall at septum" /protein_id="AAP15626.1" /db_xref="GI:30039892" /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT EKLQMQHVDPSQENIVVQK" gene 89518..91284 /gene="ftsI" /note="locus_tag: S0083" CDS 89518..91284 /gene="ftsI" /function="enzyme; Cell division" /note="residues 1 to 588 of 588 are 96.76 pct identical to residues 1 to 588 of 588 from Escherichia coli K-12 : B0084; involved in septum formation" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 3; peptidoglycan synthetase" /protein_id="AAP15627.1" /db_xref="GI:30039893" /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNSDMADYIKKLKLPGIH LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALTMPSSALVDTYSRFGLGKATNLG LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD ALTTGDKNEFVINQGEGTGGRS" gene 91271..92758 /gene="murE" /note="locus_tag: S0084" CDS 91271..92758 /gene="murE" /function="enzyme; Murein sacculus, peptidoglycan" /note="residues 1 to 495 of 495 are 89.69 pct identical to residues 1 to 495 of 495 from Escherichia coli K-12 : B0085" /codon_start=1 /transl_table=11 /product="meso-diaminopimelate-adding enzyme" /protein_id="AAP15628.1" /db_xref="GI:30039894" /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG SAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFPASVFTNLSRDHLDYHGDM EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKA TEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLALATLLALGYPLADLLKTAA RLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGGIA" gene 92755..94113 /gene="murF" /note="locus_tag: S0085" CDS 92755..94113 /gene="murF" /function="enzyme; Murein sacculus, peptidoglycan" /note="residues 1 to 452 of 452 are 94.91 pct identical to residues 1 to 452 of 452 from Escherichia coli K-12 : B0086" /codon_start=1 /transl_table=11 /product="D-alanine:D-alanine-adding enzyme" /protein_id="AAP15629.1" /db_xref="GI:30039895" /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPALV VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGMEFTLQTPTGSVDVLLP LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSMGK QSHAISTASGVGEHFADKTALITRLKSLIAEQQVITILVKGSRSAAMEEVVRALQENG TC" gene 94107..95189 /gene="mraY" /note="locus_tag: S0086" CDS 94107..95189 /gene="mraY" /function="enzyme; Murein sacculus, peptidoglycan" /note="residues 1 to 360 of 360 are 89.99 pct identical to residues 1 to 360 of 360 from Escherichia coli K-12 : B0087" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide transferase" /protein_id="AAP15630.1" /db_xref="GI:30039896" /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP EPRVIVRFWIISLMLVLIGLATLKVR" gene 95192..96508 /gene="murD" /note="locus_tag: S0087" CDS 95192..96508 /gene="murD" /function="enzyme; Murein sacculus, peptidoglycan" /note="residues 1 to 438 of 438 are 89.72 pct identical to residues 1 to 438 of 438 from Escherichia coli K-12 : B0088" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanine-D-glutamate ligase" /protein_id="AAP15631.1" /db_xref="GI:30039897" /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELS SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT MPIRGADERCVSFGVNMGDCHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALVA LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL HVDGTLHLLLGGDGKSADFSPLVRYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG" gene 96508..97752 /gene="ftsW" /note="locus_tag: S0088" CDS 96508..97752 /gene="ftsW" /function="membrane; Cell division" /note="residues 1 to 414 of 414 are 86.23 pct identical to residues 1 to 414 of 414 from Escherichia coli K-12 : B0089; involved in shape determination, cell division" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="AAP15632.1" /db_xref="GI:30039898" /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL PMEFWQRYSATMLLGSIILLMIVLVVGSAVKGASRWIDLGLLRIQPAELTKLSLFCYI ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAK LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM MLLRIDYETRLEKAQAFVRGSR" gene 97749..98816 /gene="murG" /note="locus_tag: S0089" CDS 97749..98816 /gene="murG" /function="enzyme; Murein sacculus, peptidoglycan" /note="residues 1 to 355 of 355 are 99.43 pct identical to residues 1 to 355 of 355 from Escherichia coli K-12 : B0090" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase" /protein_id="AAP15633.1" /db_xref="GI:30039899" /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHYLMAQGWQVRWLGTADR MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR AASIPDATERVANEVSRAARA" gene 98870..100345 /gene="murC" /note="locus_tag: S0090" CDS 98870..100345 /gene="murC" /function="enzyme; Murein sacculus, peptidoglycan" /note="residues 1 to 491 of 491 are 92.26 pct identical to residues 1 to 491 of 491 from Escherichia coli K-12 : B0091" /codon_start=1 /transl_table=11 /product="L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase" /protein_id="AAP15634.1" /db_xref="GI:30039900" /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY QISGSDLAPNPVTQQLLNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR QDKEPMCVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEF PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEML APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD" gene 100338..101258 /gene="ddlB" /note="locus_tag: S0091" CDS 100338..101258 /gene="ddlB" /function="enzyme; Murein sacculus, peptidoglycan" /note="residues 1 to 306 of 306 are 99.34 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B0092; affects cell division" /codon_start=1 /transl_table=11 /product="D-alanine-D-alanine ligase B" /protein_id="AAP15635.1" /db_xref="GI:30039901" /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE VDVTQLKSMGFQKVFIALHGPGGEDGTLQGMLELMGLPYTGSGVMASALSIDKLRSKL LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS DETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG MTSHSLVPMAARQAGMSFSQLVVRILELAD" gene 101260..102090 /gene="ftsQ" /note="locus_tag: S0092" CDS 101260..102090 /gene="ftsQ" /function="phenotype; Cell division" /note="residues 1 to 265 of 276 are 92.45 pct identical to residues 1 to 265 of 276 from Escherichia coli K-12 : B0093; in growth of wall at septum" /codon_start=1 /transl_table=11 /product="cell division protein" /protein_id="AAP15636.1" /db_xref="GI:30039902" /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV VLSWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPML YGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMK RLVRFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ " gene 102087..103349 /gene="ftsA" /note="locus_tag: S0093" CDS 102087..103349 /gene="ftsA" /function="phenotype; Cell division" /note="residues 1 to 420 of 420 are 100.00 pct identical to residues 1 to 420 of 420 from Escherichia coli K-12 : B0094; involved in septation process, complexes with FtsZ, associated with junctions of inner and outer membranes" /codon_start=1 /transl_table=11 /product="ATP-binding cell division protein" /protein_id="AAP15637.1" /db_xref="GI:30039903" /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN GEAEVEKRVTASVGSWIKRLNSWLRKEF" gene 103410..104561 /gene="ftsZ" /note="locus_tag: S0094" CDS 103410..104561 /gene="ftsZ" /function="enzyme; Cell division" /note="residues 1 to 383 of 383 are 87.98 pct identical to residues 1 to 383 of 383 from Escherichia coli K-12 : B0095; involved in cell division; forms circumferential ring" /codon_start=1 /transl_table=11 /product="tubulin-like GTP-binding protein and GTPase" /protein_id="AAP15638.1" /db_xref="GI:30039904" /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD" gene 104662..105579 /gene="lpxC" /note="locus_tag: S0095" CDS 104662..105579 /gene="lpxC" /function="enzyme; Surface polysaccharides and antigens" /note="residues 1 to 305 of 305 are 100.00 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 : B0096; involved in lipid A biosynthesis" /codon_start=1 /transl_table=11 /product="UDP-3-O-acyl N-acetylglucosamine deacetylase" /protein_id="AAP15639.1" /db_xref="GI:30039905" /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVL AKQEAWEYVTFQDDAELPLAFKAPSAVLA" gene 105735..106322 /gene="yacA" /note="locus_tag: S0096" CDS 105735..106322 /gene="yacA" /note="residues 1 to 195 of 195 are 92.82 pct identical to residues 1 to 195 of 195 from Escherichia coli K-12 : B0097" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15640.1" /db_xref="GI:30039906" /translation="MLWTSGFNDKICALNTFEFDRDGNNVSGILTRWRQFGKRYFWPH LLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYS VDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEK GYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT" gene 106384..109089 /gene="secA" /note="locus_tag: S0097" CDS 106384..109089 /gene="secA" /function="transport; Protein, peptide secretion" /note="residues 1 to 901 of 901 are 97.78 pct identical to residues 1 to 901 of 901 from Escherichia coli K-12 : B0098" /codon_start=1 /transl_table=11 /product="preprotein translocase; secretion protein" /protein_id="AAP15641.1" /db_xref="GI:30039907" /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPITEWLDKEPELHEETLRERIL AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ" gene 109149..109538 /gene="mutT" /note="locus_tag: S0098" CDS 109149..109538 /gene="mutT" /function="enzyme; 2-Deoxyribonucleotide metabolism" /note="residues 1 to 129 of 129 are 98.44 pct identical to residues 1 to 129 of 129 from Escherichia coli K-12 : B0099; prefers dGTP, causes AT-GC transversions" /codon_start=1 /transl_table=11 /product="7,8-dihydro-8-oxoguanine-triphosphatase" /protein_id="AAP15642.1" /db_xref="GI:30039908" /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE TPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVESWEGVPWGKEGQPG EWMSLVGLNADDFPPANEPVIAKLKRL" repeat_region 109535..109618 /note="REP (repetitive extragenic palindromic) element, contains 2 REP sequences" gene complement(109553..109687) /gene="S0099" CDS complement(109553..109687) /gene="S0099" /note="residues 1 to 44 of 44 are 97.72 pct identical to residues 1 to 44 of 44 from Escherichia coli K-12 : B0100" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15643.1" /db_xref="GI:30039909" /translation="MAIFPKAMTGAKSQSSDICLMPHVGLIRRGQRRIRHLVQMSDAA " gene complement(109638..109835) /gene="yacG" /note="locus_tag: S0100" CDS complement(109638..109835) /gene="yacG" /note="residues 1 to 65 of 65 are 100.00 pct identical to residues 1 to 65 of 65 from Escherichia coli K-12 : B0101" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15644.1" /db_xref="GI:30039910" /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE KRIPSSGDLSESDDWSEEPKQ" gene complement(109845..110588) /gene="yacF" /note="locus_tag: S0101" CDS complement(109845..110588) /gene="yacF" /note="residues 1 to 247 of 247 are 93.52 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B0102" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15645.1" /db_xref="GI:30039911" /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF RNVSELLDVFERAEVRTELLKELNRQQRKLQTWIGVPGVDQSRIEALIQQLKAAVSVL ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH KSRFAIRFMPLDTENGQVPERLDFELACC" gene complement(110588..111208) /gene="yacE" /note="locus_tag: S0102" CDS complement(110588..111208) /gene="yacE" /note="residues 1 to 206 of 206 are 93.68 pct identical to residues 1 to 206 of 206 from Escherichia coli K-12 : B0103" /codon_start=1 /transl_table=11 /product="putative DNA repair protein" /protein_id="AAP15646.1" /db_xref="GI:30039912" /translation="MGYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA PALHAIADHFGENMIAADGTLQRRALRERIFANPEEKNWLNDLLHPLIQQETQHQIQQ ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP" gene 111433..112476 /gene="guaC" /note="locus_tag: S0103" CDS 111433..112476 /gene="guaC" /function="enzyme; Purine ribonucleotide biosynthesis" /note="residues 1 to 347 of 347 are 99.13 pct identical to residues 1 to 347 of 347 from Escherichia coli K-12 : B0104" /codon_start=1 /transl_table=11 /product="GMP reductase" /protein_id="AAP15647.1" /db_xref="GI:30039913" /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSW SGVPIIAANMDTVGTFSMASALASFDILTAVHKHFSVEEWQAFINNSSADVLKHVMVS TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK RHVGGVAEYRAAEGKTVKLPLRGQVENTARDILGGLRSACTYVGASRLKELTKRTTFI RVLEQENRIFNNL" gene complement(112396..112503) /gene="S0104" CDS complement(112396..112503) /gene="S0104" /note="residues 1 to 35 of 35 are 97.14 pct identical to residues 1 to 35 of 35 from Escherichia coli K-12 : B0105" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AAP15648.1" /db_xref="GI:30039914" /translation="MLLHASVGRLQVVEDAVFLFQHTNKRGALGQLFQA" gene complement(112511..113713) /gene="hofC" /note="locus_tag: S0105" CDS complement(112511..113713) /gene="hofC" /function="putative transport; Not classified" /note="residues 1 to 400 of 400 are 85.50 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 : B0106; involved in biogenesis of fimbriae, protein transport, DNA uptake" /codon_start=1 /transl_table=11 /product="putative integral membrane protein" /protein_id="AAP15649.1" /db_xref="GI:30039915" /translation="MASKQLWRWHGITGDGNAQDGMLWAESRTLLLMALQQQMVTPLS LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAH DLEQGIAFSNALLPWSEAFPPLYQAMIRTGELTGKLDECCFELARQQKSQRQLTDKVK SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWGW LLVLFGFLLAIANKLLMRRPTWLIARQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNAGEFSPLCLQLVRTG EASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL GDAMSGMG" gene complement(113703..114850) /gene="hofB" /note="locus_tag: S0106; truncated" /pseudo gene complement(114860..115300) /gene="ppdD" /note="locus_tag: S0107" CDS complement(114860..115300) /gene="ppdD" /function="putative enzyme; Not classified" /note="residues 1 to 146 of 146 are 91.09 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B0108" /codon_start=1 /transl_table=11 /product="prelipin peptidase dependent protein" /protein_id="AAP15650.1" /db_xref="GI:30039916" /translation="MDKQRGFTLIELMVVIGIIAILSSIGIPAYQNYLRKAALTDMLQ TFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNG LSVVMTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN" gene complement(115503..116396) /gene="nadC" /note="locus_tag: S0108" CDS complement(115503..116396) /gene="nadC" /function="enzyme; Biosynthesis of cofactors, carriers: Pyridine nucleotide" /note="residues 1 to 297 of 297 are 94.61 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B0109" /codon_start=1 /transl_table=11 /product="quinolinate phosphoribosyltransferase" /protein_id="AAP15651.1" /db_xref="GI:30039917" /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ PLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD FISVGALTKHVQALDLSMRFR" gene 116484..117035 /gene="ampD" /note="locus_tag: S0109" CDS 116484..117035 /gene="ampD" /function="regulator; Not classified" /note="residues 1 to 183 of 183 are 97.81 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B0110; regulates ampC" /codon_start=1 /transl_table=11 /product="AmpD protein" /protein_id="AAP15652.1" /db_xref="GI:30039918" /translation="MLLEQGWLVGARRVPSPHYDCRLDDETPTLLVVHNISLPPGEFG GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDRYPDIANNMTGHCDIAPD RKTDPGPAFDWARFRALVSKETT" gene 117032..117886 /gene="ampE" /note="locus_tag: S0110" CDS 117032..117886 /gene="ampE" /function="regulator; Drug/analog sensitivity" /note="residues 1 to 284 of 284 are 96.47 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 : B0111; regulates ampC" /codon_start=1 /transl_table=11 /product="AmpE protein" /protein_id="AAP15653.1" /db_xref="GI:30039919" /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND SHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPV TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL LTIYGALV" gene complement(117929..119302) /gene="aroP" /note="locus_tag: S0111" CDS complement(117929..119302) /gene="aroP" /function="transport; Transport of small molecules: Amino acids, amines" /note="residues 1 to 457 of 457 are 93.65 pct identical to residues 1 to 457 of 457 from Escherichia coli K-12 : B0112" /codon_start=1 /transl_table=11 /product="aromatic amino acid transport protein" /protein_id="AAP15654.1" /db_xref="GI:30039920" /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK VIAVVAMIIFGGWLLFSGNGGPQASVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT AKAVKAH" gene 119843..120607 /gene="pdhR" /note="locus_tag: S0112" CDS 119843..120607 /gene="pdhR" /function="regulator; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="residues 1 to 228 of 254 are 99.56 pct identical to residues 1 to 228 of 254 from Escherichia coli K-12 : B0113" /codon_start=1 /transl_table=11 /product="transcriptional regulator for pyruvate dehydrogenase complex" /protein_id="AAP15655.1" /db_xref="GI:30039921" /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMVGKPEEAR EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN" gene 120768..123431 /gene="aceE" /note="locus_tag: S0113" CDS 120768..123431 /gene="aceE" /function="enzyme; Energy metabolism, carbon: Pyruvate dehydrogenase" /note="residues 1 to 887 of 887 are 99.88 pct identical to residues 1 to 887 of 887 from Escherichia coli K-12 : B0114" /codon_start=1 /t